RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PRSS2P07478 247 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 OR5G3P0C626 314 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 LINC00869P0C866 280 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 CXCL3P19876 107 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 M6PRP20645 277 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 AP3S2P59780 193 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 SELENOTP62341 195 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 PNRC1Q12796 327 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-207ENST00000483407 PSG3Q16557 428 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 TMEM182Q6ZP80 229 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-207ENST00000483407 CYP2G1PQ6ZSU1 146 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 LRTM2Q8N967 370 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 RNASE8Q8TDE3 154 aaKnown RBP4.07□□□□□ -1.76
CSDE1-207ENST00000483407 RXFP4Q8TDU9 374 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 Q9H3A6 140 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
CSDE1-207ENST00000483407 CCDC59Q9P031 241 aaKnown RBP4.07□□□□□ -1.76
CSDE1-207ENST00000483407 SNURFLB1AK76 121 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 H3BNG1 76 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 SFT2D2O95562 160 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 SMIM18P0DKX4 95 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 CXCL2P19875 107 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 PLP1P60201 277 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 SPCS2Q15005 226 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 PRR27Q6MZM9 219 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 LCN15Q6UWW0 184 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 TOMM5Q8N4H5 51 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 RAB2BQ8WUD1 216 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 RPUSD4Q96CM3 377 aaKnown RBP4.06□□□□□ -1.76
CSDE1-207ENST00000483407 UHRF2Q96PU4 802 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 SLC25A21Q9BQT8 299 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-207ENST00000483407 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 MRPS26Q9BYN8 205 aaKnown RBP4.06□□□□□ -1.76
CSDE1-207ENST00000483407 MRPS16Q9Y3D3 137 aaKnown RBP4.06□□□□□ -1.76
CSDE1-207ENST00000483407 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
CSDE1-207ENST00000483407 PKD1P98161 4303 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 A0A0J9YY99 117 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ZNF701M0R085 212 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-207ENST00000483407 NOL3O60936 208 aaKnown RBP4.05□□□□□ -1.76
CSDE1-207ENST00000483407 DLK1P80370 383 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 PPP1R1AQ13522 171 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ESRGQ1W209 222 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 OR10P1Q8NGE3 313 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 MCFD2Q8NI22 146 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 OCC1Q8TAD7 63 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 DYNC2LI1Q8TCX1 351 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 TMED6Q8WW62 240 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 DEDD2Q8WXF8 326 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 BCL7BQ9BQE9 202 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ARL6Q9H0F7 186 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ARV1Q9H2C2 271 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 NPVFQ9HCQ7 196 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ZNF331Q9NQX6 463 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-207ENST00000483407 ZNF586Q9NXT0 402 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 PSENENQ9NZ42 101 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 HSPG2P98160 4391 aa4.05□□□□□ -1.76
CSDE1-207ENST00000483407 TRGV2A0A075B6R0 118 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 FNDC10F2Z333 226 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 K7EPK0 472 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 GOSR2O14653 212 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 SSSCA1O60232 199 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 COX7A2P2O60397 106 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 LEPP41159 167 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 TMBIM6P55061 237 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 LINC00315P59091 139 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 UBE2MP61081 183 aaKnown RBP4.04□□□□□ -1.76
CSDE1-207ENST00000483407 RRAS2P62070 204 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-207ENST00000483407 POLR2GP62487 172 aaKnown RBP eCLIP4.04□□□□□ -1.76
CSDE1-207ENST00000483407 PYDC2Q56P42 97 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 GFI1BQ5VTD9 330 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 LINC00305Q7Z4B0 112 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 ZNF546Q86UE3 836 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 BPIFA4PQ86YQ2 179 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 ODF3Q96PU9 254 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 SOSTQ9BQB4 213 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
CSDE1-207ENST00000483407 TRAV12-3A0A0B4J271 114 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
CSDE1-207ENST00000483407 SIVA1O15304 175 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 METTL15P1P0C7V9 234 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 PRB4P10163 310 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-207ENST00000483407 ERVFC1-1P60608 527 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 SLC38A11Q08AI6 406 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 DAZ2Q13117 558 aaKnown RBP4.03□□□□□ -1.76
CSDE1-207ENST00000483407 PATE2Q6UY27 113 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 C9orf47Q6ZRZ4 202 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 SMIM8Q96KF7 97 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 GGACTQ9BVM4 153 aa4.03□□□□□ -1.76
CSDE1-207ENST00000483407 PARD6GQ9BYG4 376 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-207ENST00000483407 SLIRPQ9GZT3 109 aaKnown RBP4.03□□□□□ -1.76
CSDE1-207ENST00000483407 TRAV9-2A0A087WT02 112 aa4.02□□□□□ -1.77
CSDE1-207ENST00000483407 A0A096LPF7 62 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 359.3 ms