RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 FOXL2NBQ6ZUU3 175 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 FAM19A1Q7Z5A9 133 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 TMEM86BQ8N661 226 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 MYOZ3Q8TDC0 251 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 C1orf147Q96MC9 270 aaPredicted RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 SRXN1Q9BYN0 137 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 ZNF71Q9NQZ8 489 aaPredicted RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 CACNG5Q9UF02 275 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 TIMM8BQ9Y5J9 83 aaPredicted RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 LHFPL6Q9Y693 200 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 VWA8A3KMH1 1905 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 PTPRDP23468 1912 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 CHD7Q9P2D1 2997 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 OBSL1O75147 1896 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 NLRC5Q86WI3 1866 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 COL4A4P53420 1690 aaPredicted RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 GREB1Q4ZG55 1949 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 A0A087WW49 117 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 TMED7-TICAM2A0A0A6YYA0 188 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 FAM236AA0A1B0GUQ0 79 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 FAM236BA0A1B0GV22 79 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 HIGD1CA8MV81 97 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 H7C1H1 209 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 K7ENP7 123 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 K7EQG2 157 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 SLC25A20O43772 301 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 PYYP10082 97 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 RPS27P42677 84 aaKnown RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 CXCL5P42830 114 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 SPINT3P49223 89 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 RPL18Q07020 188 aaKnown RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 FXYD3Q14802 87 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 IZUMO4Q1ZYL8 232 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 TMEM170BQ5T4T1 132 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 FLVCR1-AS1Q8TAF5 88 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 C11orf45Q8TAV5 145 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 NT5CQ8TCD5 201 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 RNF138Q8WVD3 245 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 ZNF488Q96MN9 340 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 SMIM14Q96QK8 99 aa3.2□□□□□ -1.9
LTN1-205ENST00000483326 KLF13Q9Y2Y9 288 aaPredicted RBP3.2□□□□□ -1.9
LTN1-205ENST00000483326 NUP210Q8TEM1 1887 aaPredicted RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 TCF20Q9UGU0 1960 aaKnown RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 IGKV1D-8A0A087WSZ0 117 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 A0A1B0GXF2 115 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 RBAKDNA6NC62 111 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 PRAC2D3DTV9 90 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 F6UB75 175 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 PGLYRP1O75594 196 aaPredicted RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 IGLV3-27P01718 113 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 IGKCP01834 107 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 HBDP02042 147 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 COX6A1P12074 109 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 HLA-DMBP28068 263 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 PFN2P35080 140 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 CACNG7P62955 275 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 RPL18AQ02543 176 aaKnown RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 CD164Q04900 197 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 ZNF56Q15929 161 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 LINC00173Q6ZV60 143 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 RPS19BP1Q86WX3 136 aaKnown RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 PCP2Q8IVA1 136 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 OR5AS1Q8N127 324 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 NXT2Q9NPJ8 142 aaKnown RBP3.19□□□□□ -1.9
LTN1-205ENST00000483326 COL4A6Q14031 1691 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 PTPRSQ13332 1948 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 DOCK11Q5JSL3 2073 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 BPTFQ12830 3046 aa3.19□□□□□ -1.9
LTN1-205ENST00000483326 PLXNA4Q9HCM2 1894 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 CXorf51AA0A1B0GTR3 108 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 J3QQQ9 107 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 CDX4O14627 284 aaPredicted RBP3.18□□□□□ -1.9
LTN1-205ENST00000483326 PSMB8P28062 276 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 FOXA3P55318 350 aaPredicted RBP3.18□□□□□ -1.9
LTN1-205ENST00000483326 EDDM3BP56851 147 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 UBE2D3P61077 147 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 UBE2D2P62837 147 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 FAM53BQ14153 422 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 TMEM155Q4W5P6 130 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 C11orf71Q6IPW1 123 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 ZNF818PQ6ZRF7 136 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 AAED1Q7RTV5 226 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 PGLYRP4Q96LB8 373 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 LINC01600Q96MT4 127 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 TRGV9Q99603 122 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 AICDAQ9GZX7 198 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 AGPAT4-IT1Q9H0P7 198 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 ZNF442Q9H7R0 627 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 ZNF355PQ9NSJ1 428 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 TAC3Q9UHF0 121 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 PYGO1Q9Y3Y4 419 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 DOCK9Q9BZ29 2069 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 UNC80Q8N2C7 3258 aa3.18□□□□□ -1.9
LTN1-205ENST00000483326 IGHV3OR15-7A0A075B7D8 119 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 IGLV1-36A0A0B4J1U3 117 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms