RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TIRAPP58753 221 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 ERCC8Q13216 396 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 ACOT6Q3I5F7 207 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-224ENST00000481929 MORN5Q5VZ52 161 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 SMIM4Q8WVI0 70 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 TRAV8-6A0A0B4J262 113 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 GOSR2O14653 212 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 COX7A2P2O60397 106 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 RRAS2P62070 204 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-224ENST00000481929 SLC38A11Q08AI6 406 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 LAGE3Q14657 143 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 OPCMLQ14982 345 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 GUK1Q16774 197 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 NHLRC2Q8NBF2 726 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 OR10P1Q8NGE3 313 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 DNAJC4Q9NNZ3 241 aa9.85□□□□□ -0.83
HDAC6-224ENST00000481929 IGHV3-30P01768 117 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 IGHV3-33P01772 117 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 IGHV3-30-3P0DP02 117 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 IGHV3-30-5P0DP03 117 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
HDAC6-224ENST00000481929 ZNF846Q147U1 533 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 ZNF546Q86UE3 836 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 MRPL53Q96EL3 112 aaKnown RBP9.84□□□□□ -0.83
HDAC6-224ENST00000481929 RABL2BQ9UNT1 228 aa9.84□□□□□ -0.83
HDAC6-224ENST00000481929 LOC100131303A0A0U1RQF7 123 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 CRISP2P16562 243 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 TMEM37Q8WXS4 190 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 FUNDC2Q9BWH2 189 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 MCUBQ9NWR8 336 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 PSENENQ9NZ42 101 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 MGAT4CQ9UBM8 478 aa9.83□□□□□ -0.84
HDAC6-224ENST00000481929 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 FNDC10F2Z333 226 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 M0R3E3 92 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 NMBP08949 121 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 C10orf113Q5VZT2 155 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 AGPAT4-IT1Q9H0P7 198 aa9.82□□□□□ -0.84
HDAC6-224ENST00000481929 CCDC59Q9P031 241 aaKnown RBP9.82□□□□□ -0.84
HDAC6-224ENST00000481929 ZNF253O75346 499 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 CCNKO75909 580 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 VAMP1P23763 118 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
HDAC6-224ENST00000481929 TMEM128Q5BJH2 165 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 PRR9Q5T870 116 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 Q6ZQT7 251 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 ZFAND2AQ8N6M9 145 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 RASL10AQ92737 203 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 SRRQ9GZT4 340 aa9.81□□□□□ -0.84
HDAC6-224ENST00000481929 TRAV4A0A0B4J268 109 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 ANKRD20A5PA0PJZ0 165 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 AGPAT2O15120 278 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 RGS5O15539 181 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 HOXB5P09067 269 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 POLR2GP62487 172 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC6-224ENST00000481929 C9orf47Q6ZRZ4 202 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 MIXL1Q9H2W2 232 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 PRELID1Q9Y255 219 aa9.8□□□□□ -0.84
HDAC6-224ENST00000481929 A0A087WXM4 84 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 TRAV8-3A0A0A6YYJ7 113 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 METTL15P1P0C7V9 234 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 ASIPP42127 132 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 TMEM78Q5T7P6 136 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 OR4C5Q8NGB2 326 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 DAZAP1Q96EP5 407 aaKnown RBP9.79□□□□□ -0.84
HDAC6-224ENST00000481929 SPXQ9BT56 116 aa9.79□□□□□ -0.84
HDAC6-224ENST00000481929 CTDSPLO15194 276 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 SSSCA1O60232 199 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 PFN1P07737 140 aaKnown RBP9.78□□□□□ -0.84
HDAC6-224ENST00000481929 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
HDAC6-224ENST00000481929 ID3Q02535 119 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 IL18Q14116 193 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 LELP1Q5T871 98 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 RAB2BQ8WUD1 216 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
HDAC6-224ENST00000481929 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 FABP12A6NFH5 140 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 MUC21Q5SSG8 566 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 TMEM14EPQ6UXP3 125 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 Q8N976 141 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 SMIM8Q96KF7 97 aa9.77□□□□□ -0.85
HDAC6-224ENST00000481929 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-224ENST00000481929 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-224ENST00000481929 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-224ENST00000481929 Q6ZRG5 221 aa9.76□□□□□ -0.85
HDAC6-224ENST00000481929 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
HDAC6-224ENST00000481929 MGST2Q99735 147 aa9.76□□□□□ -0.85
HDAC6-224ENST00000481929 RABL2AQ9UBK7 228 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-224ENST00000481929 TIMM9Q9Y5J7 89 aa9.76□□□□□ -0.85
HDAC6-224ENST00000481929 COX11Q9Y6N1 276 aa9.76□□□□□ -0.85
HDAC6-224ENST00000481929 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms