RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	KLF7	O75840	302 aa	Predicted RBP	0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	OR2H2	O95918	312 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	IGLV3-1	P01715	115 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	APOC1	P02654	83 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	SDC4	P31431	198 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	FOXA3	P55318	350 aa	Predicted RBP	0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	FXYD6P3	P58550	94 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	PCBD1	P61457	104 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	NCS1	P62166	190 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	MIR22HG	Q0VDD5	57 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	OR8B8	Q15620	311 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	TMEM14EP	Q6UXP3	125 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	FOXI2	Q6ZQN5	318 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	IDO2	Q6ZQW0	420 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	TCTEX1D1	Q8N7M0	179 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	CCL4L1	Q8NHW4	92 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173		Q8TAT8	98 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	NAT14	Q8WUY8	206 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	MAFIP	Q8WZ33	124 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	OBSCN-AS1	Q96MR7	158 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	AMELY	Q99218	206 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	PFDN5	Q99471	154 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	COPZ2	Q9P299	210 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	JPT1	Q9UK76	154 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	HIGD1A	Q9Y241	93 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	RALGAPA2	Q2PPJ7	1873 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	HECW1	Q76N89	1606 aa		0.49	□□□□□ -2.33
CCNL1-223	ENST00000481173	NISCH	Q9Y2I1	1504 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	OVOS2	A0A0G2JMS6	1433 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	MED23	Q9ULK4	1368 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	TRAV2	A0A0B4J234	112 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173		M0R2Z0	102 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	TNFSF15	O95150	251 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	IGLV1-51	P01701	117 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	GYPB	P06028	91 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	SLC25A4	P12235	298 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	HLA-DRB4	P13762	266 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	RPS3	P23396	243 aa	Known RBP eCLIP	0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	KDELR1	P24390	212 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	SNRPD3	P62318	126 aa	Known RBP	0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	S100A12	P80511	92 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	MORN2	Q502X0	79 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	TMEM244	Q5VVB8	128 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	KRTAP26-1	Q6PEX3	210 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	UNQ5815/PRO19632	Q6UWF5	114 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	IZUMO2	Q6UXV1	221 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	LINC00575	Q6W349	94 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	CTAGE3P	Q8IX95	158 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	ATOH7	Q8N100	152 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	LINC00269	Q8N2A0	174 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	C10orf111	Q8N326	155 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	SAR1A	Q9NR31	198 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	FKBP11	Q9NYL4	201 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	TAS2R8	Q9NYW2	309 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	METTL1	Q9UBP6	276 aa	Known RBP	0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	HLA-DRB4	X5D2U9	266 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	FN1	P02751	2386 aa	Known RBP	0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	SCN9A	Q15858	1988 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	ADGRB2	O60241	1585 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	NCKAP5	O14513	1909 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	DLC1	Q96QB1	1528 aa		0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	NYNRIN	Q9P2P1	1898 aa	Known RBP	0.48	□□□□□ -2.33
CCNL1-223	ENST00000481173	FHAD1	B1AJZ9	1412 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	RFX7	Q2KHR2	1363 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	DSPP	Q9NZW4	1301 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173		A0A0G2JMM0	328 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	ZNF727	A8MUV8	499 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173		B4DSR2	109 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	TPST1	O60507	370 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	IGHV3-30	P01768	117 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	MT-ND4L	P03901	98 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	TCRA	P04437	139 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	SLC25A5	P05141	298 aa	Known RBP	0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	IGHV3-30-5	P0DP03	117 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	COX4I1	P13073	169 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	EVI2A	P22794	236 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	POLR2J	P52435	117 aa	Known RBP	0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	CKS1B	P61024	79 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	SARNP	P82979	210 aa	Known RBP	0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	QRFP	P83859	136 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	PLGLB1	Q02325	96 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	RHOH	Q15669	191 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	OCIAD2	Q56VL3	154 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	TMEM91	Q6ZNR0	172 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173		Q6ZQY7	126 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173		Q6ZS92	163 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	OTOS	Q8NHW6	89 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	PPDPFL	Q8WWR9	84 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	ZC2HC1A	Q96GY0	325 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	NABP2	Q9BQ15	211 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	SLC35B3	Q9H1N7	401 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	ATG5	Q9H1Y0	275 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	BANF2	Q9H503	90 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	C22orf24	Q9Y442	160 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	KIF1B	O60333	1816 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	CECR2	Q9BXF3	1484 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	DISP2	A7MBM2	1401 aa		0.47	□□□□□ -2.33
CCNL1-223	ENST00000481173	PBRM1	Q86U86	1689 aa		0.46	□□□□□ -2.34

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms