RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SND1-IT1Q9HBX3 110 aa2.8□□□□□ -1.96
UPF3A-207ENST00000481131 TAS2R8Q9NYW2 309 aa2.8□□□□□ -1.96
UPF3A-207ENST00000481131 RBMX2Q9Y388 322 aaKnown RBP2.8□□□□□ -1.96
UPF3A-207ENST00000481131 WASHC3Q9Y3C0 194 aa2.8□□□□□ -1.96
UPF3A-207ENST00000481131 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 LOC102724200A0A096LPH7 203 aaPredicted RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 CLPSL1A2RUU4 121 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 FABP12A6NFH5 140 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 C16orf90A8MZG2 172 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 SEC14L6B5MCN3 397 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 SULT1C2O00338 296 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 GSTZ1O43708 216 aaPredicted RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 NDUFS5O43920 106 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 NDUFA3O95167 84 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 APOA2P02652 100 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 CTXN2P0C2S0 81 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 APELAP0DMC3 54 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 S100A5P33763 92 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 TSPAN5P62079 268 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 DEFA5Q01523 94 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 SCGB2B2Q4G0G5 96 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 RNASE10Q5GAN6 216 aaKnown RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 KPRPQ5T749 579 aaPredicted RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 AADACL3Q5VUY0 350 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 SLC35E3Q7Z769 313 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 ORMDL3Q8N138 153 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 Q8N2B8 174 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 C3orf56Q8N813 242 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 TMEM229BQ8NBD8 167 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 OR51H1Q8NH63 302 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 CASTOR1Q8WTX7 329 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 FAM103A1Q9BTL3 118 aaKnown RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 SRRQ9GZT4 340 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 PARP11Q9NR21 331 aa2.79□□□□□ -1.96
UPF3A-207ENST00000481131 METTL1Q9UBP6 276 aaKnown RBP2.79□□□□□ -1.96
UPF3A-207ENST00000481131 IGHV3OR16-8A0A075B7F1 116 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 TRAV3A0A0B4J244 114 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 LINC00854A0A1B0GVQ3 168 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 A0A1B0GW64 132 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 G3V318 75 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 FGF16O43320 207 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 S1PR2O95136 353 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 CA2P00918 260 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 IGHG2P01859 326 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 HLA-DRB1P01911 266 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 CD5P06127 495 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 AKAIN1P0CW23 69 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 SAA1P0DJI8 122 aaPredicted RBP2.78□□□□□ -1.96
UPF3A-207ENST00000481131 ETV6P41212 452 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 MRPS10P82664 201 aaKnown RBP2.78□□□□□ -1.96
UPF3A-207ENST00000481131 PLGLAQ15195 96 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 RTL8BQ17RB0 113 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 ACTBL2Q562R1 376 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 PRSS54Q6PEW0 395 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 LHFPL1Q86WI0 220 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 PDPNQ86YL7 162 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 Q8N402 240 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 LINC00337Q8N6G1 96 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 OR13C8Q8NGS7 320 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 GRPEL2Q8TAA5 225 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 HRASLSQ9HDD0 168 aa2.78□□□□□ -1.96
UPF3A-207ENST00000481131 NBEAL1Q6ZS30 2694 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 E7EUB6 86 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 M0QZK8 103 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 GPR31O00270 319 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 GATCO43716 136 aaKnown RBP2.77□□□□□ -1.97
UPF3A-207ENST00000481131 OR7C2O60412 319 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 PGLYRP1O75594 196 aaPredicted RBP2.77□□□□□ -1.97
UPF3A-207ENST00000481131 SCO1O75880 301 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 IFNA6P05013 189 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 IL7P13232 177 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 CD40LGP29965 261 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 G6PCP35575 357 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 LPAR6P43657 344 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 PIGPP57054 158 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 SSBP1Q04837 148 aaKnown RBP2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TNXAQ16473 311 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 DEFB136Q30KP8 78 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TTC32Q5I0X7 151 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 MORN3Q6PF18 240 aaPredicted RBP2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TOMM5Q8N4H5 51 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 LFNGQ8NES3 379 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TERB2Q8NHR7 220 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 LHFPL5Q8TAF8 219 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 ADTRPQ96IZ2 230 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TP53RKQ96S44 253 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 RTBDNQ9BSG5 229 aaPredicted RBP2.77□□□□□ -1.97
UPF3A-207ENST00000481131 HINT2Q9BX68 163 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 SLC2A9Q9NRM0 540 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 PRELID3BQ9Y3B1 194 aa2.77□□□□□ -1.97
UPF3A-207ENST00000481131 TRAV41A0A0B4J266 112 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 TCRBV4S1A1TA0A5B7 111 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 ZNF98A6NK75 572 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 A8MWL6 223 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 DISC1C4P0D8 188 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 PLA2G10O15496 165 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 CNIH1O95406 144 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms