RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 TMEM256Q8N2U0 113 aa14.4□□□□□ -0.1
VPS36-204ENST00000480923 EXOC3-AS1Q8N2X6 119 aa14.4□□□□□ -0.1
VPS36-204ENST00000480923 AAMDCQ9H7C9 122 aa14.4□□□□□ -0.1
VPS36-204ENST00000480923 PRELID1Q9Y255 219 aa14.4□□□□□ -0.1
VPS36-204ENST00000480923 NPIPB6E9PJ23 425 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 OR7C2O60412 319 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 OR10J4P0C629 311 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 NBEAP1P0C6P0 100 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 HTN1P15515 57 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 RAB5CP51148 216 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 LGALS9CQ6DKI2 356 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 OR10G4Q8NGN3 311 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 OR10G9Q8NGN4 311 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 OR10G7Q8NGN6 311 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 RNF141Q8WVD5 230 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 NIPSNAP3BQ9BS92 247 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 APLNQ9ULZ1 77 aa14.39□□□□□ -0.11
VPS36-204ENST00000480923 IGHV4-4A0A075B6R2 117 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 J3KRW8 73 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 LEPP41159 167 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 TAS2R60P59551 318 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 RAB2AP61019 212 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 ICAM4Q14773 271 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 KIR3DS1Q14943 382 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 TEX261Q6UWH6 196 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 ALKAL2Q6UX46 152 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 FXYD5Q96DB9 178 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 PLA2G2EQ9NZK7 142 aa14.38□□□□□ -0.11
VPS36-204ENST00000480923 A0A1W2PPV4 95 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 IFNA7P01567 189 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 CT45A10P0DMU9 189 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 AZU1P20160 251 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 FAM122CQ6P4D5 195 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 DPPA3Q6W0C5 159 aa14.37□□□□□ -0.11
VPS36-204ENST00000480923 SULT1A2P50226 295 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 TAS2R45P59539 299 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 DAD1P61803 113 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 UBE2L3P68036 154 aaKnown RBP14.36□□□□□ -0.11
VPS36-204ENST00000480923 ERCC8Q13216 396 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 KHDC3LQ587J8 217 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 GFI1BQ5VTD9 330 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 C20orf144Q9BQM9 153 aa14.36□□□□□ -0.11
VPS36-204ENST00000480923 ACTR3CQ9C0K3 210 aaPredicted RBP14.36□□□□□ -0.11
VPS36-204ENST00000480923 H7BYZ3 331 aa14.35□□□□□ -0.11
VPS36-204ENST00000480923 HTN3P15516 51 aa14.35□□□□□ -0.11
VPS36-204ENST00000480923 ZNF680Q8NEM1 530 aa14.35□□□□□ -0.11
VPS36-204ENST00000480923 ZNF503Q96F45 646 aa14.35□□□□□ -0.11
VPS36-204ENST00000480923 EIF3GO75821 320 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS36-204ENST00000480923 CDC34P49427 236 aaPredicted RBP14.34□□□□□ -0.11
VPS36-204ENST00000480923 FAM213BQ8TBF2 198 aa14.34□□□□□ -0.11
VPS36-204ENST00000480923 C16orf74Q96GX8 76 aa14.34□□□□□ -0.11
VPS36-204ENST00000480923 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
VPS36-204ENST00000480923 LYRM9A8MSI8 78 aa14.33□□□□□ -0.12
VPS36-204ENST00000480923 IGKV2D-40P01614 121 aaPredicted RBP14.33□□□□□ -0.12
VPS36-204ENST00000480923 RANP62826 216 aaKnown RBP14.33□□□□□ -0.12
VPS36-204ENST00000480923 FAM74A1Q5RGS3 127 aa14.33□□□□□ -0.12
VPS36-204ENST00000480923 LINC00477Q96M19 166 aa14.33□□□□□ -0.12
VPS36-204ENST00000480923 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
VPS36-204ENST00000480923 AGPAT4-IT1Q9H0P7 198 aa14.33□□□□□ -0.12
VPS36-204ENST00000480923 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 CTXND1A0A1B0GTU2 59 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 FHITP49789 147 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 TMEM78Q5T7P6 136 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 ZNF493Q6ZR52 646 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 RAB24Q969Q5 203 aa14.32□□□□□ -0.12
VPS36-204ENST00000480923 PLAC8L1A1L4L8 177 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 DEFB130BP0DP73 79 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 DEFB130AP0DP74 79 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 CSN1S1P47710 185 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 CCDC28AQ8IWP9 274 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 LYPD1Q8N2G4 141 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 Q9H3A6 140 aa14.31□□□□□ -0.12
VPS36-204ENST00000480923 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
VPS36-204ENST00000480923 C9orf47Q6ZRZ4 202 aa14.3□□□□□ -0.12
VPS36-204ENST00000480923 TMEM263Q8WUH6 116 aaKnown RBP14.3□□□□□ -0.12
VPS36-204ENST00000480923 VGLL1Q99990 258 aa14.3□□□□□ -0.12
VPS36-204ENST00000480923 TIMM8BQ9Y5J9 83 aaPredicted RBP14.3□□□□□ -0.12
VPS36-204ENST00000480923 C7orf71A4D174 169 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 H2AFB1P0C5Y9 115 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 STAG3L2P0CL84 134 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 STAG3L3P0CL85 134 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 BLOC1S1P78537 153 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 IFITM2Q01629 132 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 ZNF726P1Q15940 193 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 PQLC2Q6ZP29 291 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 RNASE8Q8TDE3 154 aaKnown RBP14.29□□□□□ -0.12
VPS36-204ENST00000480923 MBD3L1Q8WWY6 194 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 FAM19A4Q96LR4 140 aa14.29□□□□□ -0.12
VPS36-204ENST00000480923 MAP1LC3B2A6NCE7 125 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 TEX46H3BTG2 121 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 HMGB3O15347 200 aaKnown RBP14.28□□□□□ -0.12
VPS36-204ENST00000480923 RNASE4P34096 147 aaKnown RBP14.28□□□□□ -0.12
VPS36-204ENST00000480923 BTN1A1Q13410 526 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 SFT2D1Q8WV19 159 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 FAM210BQ96KR6 192 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 MAP1LC3BQ9GZQ8 125 aa14.28□□□□□ -0.12
VPS36-204ENST00000480923 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
VPS36-204ENST00000480923 KLLNB2CW77 178 aa14.27□□□□□ -0.13
VPS36-204ENST00000480923 CXorf1O96002 111 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms