RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 TRAV4A0A0B4J268 109 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 A0A0D9SFI3 127 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 DUXBA0A1W2PPF3 345 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 FAM25EA8MYX2 175 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 PGRMC1O00264 195 aaKnown RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 RER1O15258 196 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 CHP2O43745 196 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 RPP14O95059 124 aaKnown RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 NDUFC2O95298 119 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 APODP05090 189 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 LSM3P62310 102 aaKnown RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 TPM4P67936 248 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 VMA21Q3ZAQ7 101 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 AKIRIN2Q53H80 203 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 FKBP1CQ5VVH2 108 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 TMEM14EPQ6UXP3 125 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 ZCCHC23Q6ZST2 131 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 CROCCP2Q86T23 111 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 FAM216BQ8N7L0 139 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 C5orf56Q8N8D9 126 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 OR5AK2Q8NH90 309 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 AP3S1Q92572 193 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 MALSU1Q96EH3 234 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 DMAC1Q96GE9 116 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 LINC00208Q96KT6 92 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 CIB3Q96Q77 187 aaPredicted RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 KIAA1107Q9UPP5 1409 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 PKIGQ9Y2B9 76 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 ZNF292O60281 2723 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 APC2O95996 2303 aa-0.35□□□□□ -2.46
HPS3-205ENST00000478525 CAMSAP2Q08AD1 1489 aa-0.35□□□□□ -2.46
HPS3-205ENST00000478525 PIK3C2GO75747 1445 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 BLMP54132 1417 aaPredicted RBP-0.35□□□□□ -2.47
HPS3-205ENST00000478525 SPTBN1Q01082 2364 aaKnown RBP-0.35□□□□□ -2.47
HPS3-205ENST00000478525 UHRF1BP1Q6BDS2 1440 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 PARP14Q460N5 1801 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 TEX49A0A1B0GTD5 131 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 FAM236DA0A1B0GTK5 79 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 TMEM30CPA0ZSE6 113 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 C9orf170A2RU37 121 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 IFITM5A6NNB3 132 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 NDUFS6O75380 124 aaKnown RBP-0.35□□□□□ -2.47
HPS3-205ENST00000478525 IGLV1-51P01701 117 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 TRACP01848 142 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 IFNA6P05013 189 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 S100A6P06703 90 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 MPC1LP0DKB6 136 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 FAM236CP0DP71 79 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 NFYBP25208 207 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 NDUFA6P56556 154 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 FXYD3Q14802 87 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 NEDD8Q15843 81 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 KRTAP19-7Q3SYF9 63 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 STAG3L4Q8TBR4 150 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 OR4C12Q96R67 309 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 CYP4F30PQ9H0H9 118 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 UQCC1Q9NVA1 299 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 BET1LQ9NYM9 111 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 MRPL36Q9P0J6 103 aaKnown RBP-0.35□□□□□ -2.47
HPS3-205ENST00000478525 SCP2D1Q9UJQ7 156 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 ADGBQ8N7X0 1667 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 RREB1Q92766 1687 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 PLCE1Q9P212 2302 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 STAB2Q8WWQ8 2551 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 C2CD3Q4AC94 2353 aa-0.35□□□□□ -2.47
HPS3-205ENST00000478525 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.35□□□□□ -2.47
HPS3-205ENST00000478525 MAP1BP46821 2468 aaKnown RBP-0.36□□□□□ -2.47
HPS3-205ENST00000478525 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 CTTNBP2Q8WZ74 1663 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 MIA2Q96PC5 1412 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 TENM2Q9NT68 2774 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 KIDINS220Q9ULH0 1771 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 FLNBO75369 2602 aaKnown RBP-0.36□□□□□ -2.47
HPS3-205ENST00000478525 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 TRAV17A0A0B4J275 112 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 RBAKDNA6NC62 111 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 C5orf58C9J3I9 102 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 TMEM256-PLSCR3K7ERE1 68 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 IFNA21P01568 189 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 OGNP20774 298 aaKnown RBP-0.36□□□□□ -2.47
HPS3-205ENST00000478525 PHBP35232 272 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 RPL35P42766 123 aaKnown RBP-0.36□□□□□ -2.47
HPS3-205ENST00000478525 CAPZBP47756 277 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 RHOHQ15669 191 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 DEFB109BQ30KR1 87 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 MYO7BQ6PIF6 2116 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 OR8J3Q8NGG0 315 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 OR2H1Q9GZK4 316 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 OR2J1Q9GZK6 312 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 ATG5Q9H1Y0 275 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.36□□□□□ -2.47
HPS3-205ENST00000478525 ATP6V1DQ9Y5K8 247 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 PLXNA2O75051 1894 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 PLXNA1Q9UIW2 1896 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 HECW1Q76N89 1606 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 ACANP16112 2415 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 CEP164Q9UPV0 1460 aa-0.36□□□□□ -2.47
HPS3-205ENST00000478525 AKAP11Q9UKA4 1901 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms