RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 IGLV5-45A0A087WSX0 123 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV1-3A0A0C4DH29 117 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV2-70DA0A0C4DH43 119 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 A6NDN8 102 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 K7EM74 188 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 K7EP13 123 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 CD5LO43866 347 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 CNIH1O95406 144 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 FRMD6-AS1P0C7T7 363 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 IGLL1P15814 213 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 LOXP28300 417 aaPredicted RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 TFPI2P48307 235 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 RAB9AP51151 201 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 CRIP2P52943 208 aaPredicted RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 DLX6P56179 175 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SEC11AP67812 179 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 BSPH1Q075Z2 132 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 VAMP3Q15836 100 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 PSG3Q16557 428 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SAPCD1Q5SSQ6 148 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 UTF1Q5T230 341 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 EBLN2Q6P2I7 272 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 PRNTQ86SH4 94 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF843Q8N446 348 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 RPRMLQ8N4K4 120 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 STPG4Q8N801 248 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 OR9G4Q8NGQ1 327 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SRSF12Q8WXF0 261 aaKnown RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 CCL17Q92583 94 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 RNASE6Q93091 150 aaKnown RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 RPEQ96AT9 228 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 LINC00479Q96M42 142 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 DUX3Q96PT4 197 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SPXQ9BT56 116 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SHANK2-AS3Q9BTD1 123 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 SLC25A39Q9BZJ4 359 aaPredicted RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 PEF1Q9UBV8 284 aaKnown RBP3.33□□□□□ -1.88
GPNMB-210ENST00000478451 CFAP54Q96N23 3096 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 MYO15AQ9UKN7 3530 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 ZGRF1Q86YA3 2104 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 BDP1A6H8Y1 2624 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 PIEZO2Q9H5I5 2752 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 TRBV19A0A075B6N1 114 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 SPAARA0A1B0GVQ0 90 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 TMEM189A5PLL7 270 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 E7EUB6 86 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 H3BRN7 92 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 BUB1B-PAK6H3BSN5 160 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 K7ERU9 68 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 SIVA1O15304 175 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 NBR2O15453 112 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 GNG7O60262 68 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 IGLV1-47P01700 117 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 APOHP02749 345 aaPredicted RBP3.32□□□□□ -1.88
GPNMB-210ENST00000478451 CRYGBP07316 175 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 IGLC1P0CG04 106 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 RPL7P18124 248 aaKnown RBP3.32□□□□□ -1.88
GPNMB-210ENST00000478451 BMI1P35226 326 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 GPR6P46095 362 aaPredicted RBP3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LINC01547P58512 204 aaPredicted RBP3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 C10orf55Q5SWW7 151 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 GDF5OSQ5U4N7 250 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LINC01545Q5VT33 79 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LGALS9CQ6DKI2 356 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LCN12Q6JVE5 192 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 HCP5Q6MZN7 132 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 LYPD2Q6UXB3 125 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 GTF2H5Q6ZYL4 71 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 SMIM15Q7Z3B0 74 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 PHLDA1Q8WV24 401 aaPredicted RBP3.32□□□□□ -1.88
GPNMB-210ENST00000478451 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 SCRT2Q9NQ03 307 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 CLEC5AQ9NY25 188 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 PSG8Q9UQ74 426 aa3.32□□□□□ -1.88
GPNMB-210ENST00000478451 SVILO95425 2214 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 PPIAL4CA0A0B4J2A2 164 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 WI2-2373I1.2A0A1W2PRP0 233 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 OOSP1A8MZH6 123 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 SHISA9B4DS77 424 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 I3L2K1 104 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 M0R1W7 72 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 HBDP02042 147 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 PPBPP02775 128 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 PRSS1P07477 247 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 PPIAL4GP0DN37 164 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 COX8AP10176 69 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 GPR183P32249 361 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 CDKN1BP46527 198 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ARF6P62330 175 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 RHOGP84095 191 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 COTL1Q14019 142 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 FAM120AOSQ5T036 256 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 UNQ5815/PRO19632Q6UWF5 114 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF841Q6ZN19 808 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms