RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ARF6P62330 175 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 PRB3Q04118 309 aaPredicted RBP3.87□□□□□ -1.79
SF3B6-202ENST00000478050 PDE6HQ13956 83 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 PMCHL1Q16048 86 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 C5orf64Q2M2E5 130 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 GDF5OSQ5U4N7 250 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 TCF24Q7RTU0 167 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 DTX2Q86UW9 622 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 NIT1Q86X76 327 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 ARL6IP6Q8N6S5 226 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 Q8N976 141 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 IGFBPL1Q8WX77 278 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 TMEM158Q8WZ71 300 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 RCHY1Q96PM5 261 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 ALKBH7Q9BT30 221 aaPredicted RBP3.87□□□□□ -1.79
SF3B6-202ENST00000478050 FAM103A1Q9BTL3 118 aaKnown RBP3.87□□□□□ -1.79
SF3B6-202ENST00000478050 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
SF3B6-202ENST00000478050 IGLV11-55A0A075B6I3 123 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 TRBV19A0A075B6N1 114 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 A0A1B0GW15 77 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 C20orf202A1L168 122 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 H3BTX0 84 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 M0R2Z0 102 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 CHEK1O14757 476 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 MRPS12O15235 138 aaKnown RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 GNG7O60262 68 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 ELANEP08246 267 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 C3orf79P0CE67 100 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 IGLC2P0DOY2 106 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 NTF3P20783 257 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 FCGR2BP31994 310 aaPredicted RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 CTRLP40313 264 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 CAMPP49913 170 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 TIRAPP58753 221 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 KLRD1Q13241 179 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 RIGQ13278 110 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 EBI3Q14213 229 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 HES1Q14469 280 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 SPATA45Q537H7 98 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 LDLRAD2Q5SZI1 272 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 LEMD1Q68G75 181 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 Q6AWC8 147 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF562Q6V9R5 426 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 SIGLEC15Q6ZMC9 328 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 LINC00322Q6ZN03 302 aaPredicted RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF705AQ6ZN79 300 aaPredicted RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 GOLT1AQ6ZVE7 132 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 VMO1Q7Z5L0 202 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 PRNTQ86SH4 94 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 TTC9CQ8N5M4 171 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 Q8N6K4 173 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 KLHDC1Q8N7A1 406 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF491Q8N8L2 437 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 GATD1Q8NB37 220 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 ARPC1AQ92747 370 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 CHCHD1Q96BP2 118 aaKnown RBP3.86□□□□□ -1.79
SF3B6-202ENST00000478050 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 SGK494Q96LW2 274 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 TXN2Q99757 166 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 SNHG12Q9BXW3 62 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 AAMDCQ9H7C9 122 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 C1RLQ9NZP8 487 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 THYN1Q9P016 225 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 PAM16Q9Y3D7 125 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 HILPDAQ9Y5L2 63 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 HIVEP2P31629 2446 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
SF3B6-202ENST00000478050 VWC2LB2RUY7 222 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 IGLV2-11P01706 119 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 IL4P05112 153 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 OR5AL1P0C617 328 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 TMEM11P17152 192 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 RPL7P18124 248 aaKnown RBP3.85□□□□□ -1.79
SF3B6-202ENST00000478050 CSN1S1P47710 185 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 PSG9Q00887 426 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 PSG3Q16557 428 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 Q56UQ5 140 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 ASPHD1Q5U4P2 390 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 RNASEKQ6P5S7 137 aaKnown RBP3.85□□□□□ -1.79
SF3B6-202ENST00000478050 LHFPL4Q7Z7J7 247 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 EXOC3-AS1Q8N2X6 119 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 CIARTQ8N365 385 aaPredicted RBP3.85□□□□□ -1.79
SF3B6-202ENST00000478050 FAM19A2Q8N3H0 131 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 OR2D3Q8NGH3 330 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF414Q96IQ9 312 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 NDFIP1Q9BT67 221 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 C21orf62Q9NYP8 219 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 UQCR10Q9UDW1 63 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 PSG8Q9UQ74 426 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
SF3B6-202ENST00000478050 NSD1Q96L73 2696 aaPredicted RBP3.85□□□□□ -1.79
SF3B6-202ENST00000478050 ABCA1O95477 2261 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 AKAP6Q13023 2319 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 TRGV11A0A075B6L2 103 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 LOC102724200A0A096LPH7 203 aaPredicted RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms