RNA–Protein interactions for RNA: ENST00000478043.1

SMIM9-202, Transcript of small integral membrane protein 9, humanhuman

TSL 4

Gene SMIM9, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9-202ENST00000478043 ABCA1O95477 2261 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 DOCK3Q8IZD9 2030 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 SCN3AQ9NY46 2000 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 PKHD1L1Q86WI1 4243 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 KIF1BO60333 1816 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 J3QRK9 145 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 CYB5BO43169 146 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 RHOBP62745 196 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 DYNLT1P63172 113 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 SPRNQ5BIV9 151 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 Q8IYB0 196 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 Q8N6K4 173 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 TEX47Q8TBZ9 253 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 FAM172AQ8WUF8 416 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 ITFG2Q969R8 447 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 AMELYQ99218 206 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 C6orf62Q9GZU0 229 aaPredicted RBP0.55□□□□□ -2.32
SMIM9-202ENST00000478043 UCK1Q9HA47 277 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 CHCHD2Q9Y6H1 151 aaPredicted RBP0.55□□□□□ -2.32
SMIM9-202ENST00000478043 DNAH5Q8TE73 4624 aa0.55□□□□□ -2.32
SMIM9-202ENST00000478043 PXDNQ92626 1479 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 TRAV4A0A0B4J268 109 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 CLDN25C9JDP6 229 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 GADD45GO95257 159 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 ANP32AP39687 249 aaKnown RBP0.54□□□□□ -2.32
SMIM9-202ENST00000478043 ERVS71-1P61550 626 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 STAG3L4Q8TBR4 150 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 C4orf3Q8WVX3 66 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 PATE1Q8WXA2 126 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 SIGMAR1Q99720 223 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 PRADC1Q9BSG0 188 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 CACNA1CQ13936 2221 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 OBSL1O75147 1896 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 FANCAO15360 1455 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 C1orf167Q5SNV9 1468 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 EML5Q05BV3 1969 aa0.54□□□□□ -2.32
SMIM9-202ENST00000478043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.54□□□□□ -2.32
SMIM9-202ENST00000478043 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 SAMD9Q5K651 1589 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 WDR97A6NE52 1622 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 MYO3AQ8NEV4 1616 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 NHSQ6T4R5 1651 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 KNDC1Q76NI1 1749 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 AFDNP55196 1824 aaKnown RBP0.53□□□□□ -2.32
SMIM9-202ENST00000478043 OR7C1O76099 320 aaPredicted RBP0.53□□□□□ -2.32
SMIM9-202ENST00000478043 SERPINB9P50453 376 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 PIGPP57054 158 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 SLC30A7Q8NEW0 376 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 TMEM126AQ9H061 195 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 PARVBQ9HBI1 364 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 FMN1Q68DA7 1419 aa0.53□□□□□ -2.32
SMIM9-202ENST00000478043 GOLGA3Q08378 1498 aa0.53□□□□□ -2.33
SMIM9-202ENST00000478043 DNAH10Q8IVF4 4471 aa0.53□□□□□ -2.33
SMIM9-202ENST00000478043 IQGAP1P46940 1657 aa0.53□□□□□ -2.33
SMIM9-202ENST00000478043 TIAM2Q8IVF5 1701 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 LOC285556D6RIA3 1793 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 SBF2Q86WG5 1849 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 ARFGEF1Q9Y6D6 1849 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 CCL25O15444 150 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 CCL16O15467 120 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 DHFRP00374 187 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 CTXN2P0C2S0 81 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 CYBAP13498 195 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 ERP29P30040 261 aaKnown RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 SRP14P37108 136 aaKnown RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 EIF5AP63241 154 aaKnown RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 LYRM7Q5U5X0 104 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 OR11H6Q8NGC7 330 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 BORCS5Q969J3 196 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 ERBINQ96RT1 1412 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 TRAPPC8Q9Y2L5 1435 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 ERVK-7P63135 1459 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 MAGI2Q86UL8 1455 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 MAGI1Q96QZ7 1491 aaPredicted RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 PRDM15P57071 1507 aaPredicted RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 PHRF1Q9P1Y6 1649 aaKnown RBP0.52□□□□□ -2.33
SMIM9-202ENST00000478043 UBR1Q8IWV7 1749 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 PLXNA1Q9UIW2 1896 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 KIAA1549Q9HCM3 1950 aa0.52□□□□□ -2.33
SMIM9-202ENST00000478043 DNAH3Q8TD57 4116 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 TRBV19A0A075B6N1 114 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 TRBV6-4A0A1B0GX49 114 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 FAM159BA6NKW6 160 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 TIMM17BO60830 172 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 ATP5G3P48201 142 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 KRR1Q13601 381 aaKnown RBP0.51□□□□□ -2.33
SMIM9-202ENST00000478043 QSER1Q2KHR3 1735 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 RRN3P1Q2M238 152 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 SMG6Q86US8 1419 aaKnown RBP0.51□□□□□ -2.33
SMIM9-202ENST00000478043 PDZD9Q8IXQ8 264 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 TMEM254Q8TBM7 123 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 GNPDA2Q8TDQ7 276 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 KIFC1Q9BW19 673 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 PLXNA4Q9HCM2 1894 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 UGGT2Q9NYU1 1516 aa0.51□□□□□ -2.33
SMIM9-202ENST00000478043 LPAP08519 4548 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms