RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 DCUN1D5Q9BTE7 237 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 MRPS26Q9BYN8 205 aaKnown RBP-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 CCDC90BQ9GZT6 254 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 KIAA0100Q14667 2235 aaKnown RBP-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 PLECQ15149 4684 aaKnown RBP-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 ARAP1Q96P48 1450 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 C9orf84Q5VXU9 1444 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 TRAV4A0A0B4J268 109 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 GOLGA8KD6RF30 607 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 CHP2O43745 196 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 GGCTO75223 188 aaKnown RBP-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 TCRBP04435 133 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 SMIM17P0DL12 118 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 DYNLT3P51808 116 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 BLVRAP53004 296 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 SPCS3P61009 180 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 EMX2Q04743 252 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 TMED1Q13445 227 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 ACOT6Q3I5F7 207 aaPredicted RBP-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 Q6Q795 121 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 GRPEL2Q8TAA5 225 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 SMIM11BQ8TCY0 68 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 TEX37Q96LM6 180 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 NPCDR1Q9BY65 106 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 BIN3Q9NQY0 253 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 AGPAT3Q9NRZ7 376 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 TVP23BQ9NYZ1 205 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 ANK3Q12955 4377 aaKnown RBP-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 BICRAQ9NZM4 1560 aa-1.3□□□□□ -2.62
NCKAP1-204ENST00000477988 USF3Q68DE3 2245 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 PRRC2CQ9Y520 2896 aaKnown RBP-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 FABP12A6NFH5 140 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 FAM159BA6NKW6 160 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 ZNF815PA8K554 130 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 M0QZ92 97 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 TTRP02766 147 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 PIGPP57054 158 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 DEFA3P59666 94 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 AESQ08117 197 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 OR2F1Q13607 317 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 DIAPH2-AS1Q14236 149 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 HIST3H3Q16695 136 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 BCL2L15Q5TBC7 163 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 HACD4Q5VWC8 232 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 IZUMO2Q6UXV1 221 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 CT55Q8WUE5 264 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 ARL5BQ96KC2 179 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 AP1S3Q96PC3 154 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 SIKE1Q9BRV8 207 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 LAMA1P25391 3075 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 WDR97A6NE52 1622 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 GOLGA3Q08378 1498 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 IQSEC2Q5JU85 1478 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 MYO7BQ6PIF6 2116 aa-1.31□□□□□ -2.62
NCKAP1-204ENST00000477988 KIAA1107Q9UPP5 1409 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 CUBNO60494 3623 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 ZNF142P52746 1687 aaPredicted RBP-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 COL12A1Q99715 3063 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 hCG_1818297A0A087WSY0 165 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 hADV38S2A0JD32 116 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 TRPC5OSA6NMA1 111 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 A8MT66 165 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 C9JAW5 83 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 TAX1BP3O14907 124 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 C8GP07360 202 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 PYYP10082 97 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 TCL1AP56279 114 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 MED21Q13503 144 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 LYRM7Q5U5X0 104 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 EIF5AL1Q6IS14 154 aaKnown RBP-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 SSBP3-AS1Q7Z2R9 100 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 OR6V1Q8N148 313 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 LSM5Q9Y4Y9 91 aaKnown RBP-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 ASB4Q9Y574 426 aa-1.32□□□□□ -2.62
NCKAP1-204ENST00000477988 MAP3K5Q99683 1374 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 CELSR3Q9NYQ7 3312 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 LOC730098B7Z3J9 87 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 H0Y980 276 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 K7ERJ3 54 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 KPNA3O00505 521 aaPredicted RBP-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 CNIH1O95406 144 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 APOEP02649 317 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 APODP05090 189 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 CRHP06850 196 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 TPM2P07951 284 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 OCMP0CE72 109 aaPredicted RBP-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 GLRXP35754 106 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 ATP5G3P48201 142 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 VMA21Q3ZAQ7 101 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 OGFRL1Q5TC84 451 aaPredicted RBP-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 HIST2H3PS2Q5TEC6 136 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 CLEC6AQ6EIG7 209 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 C3orf62Q6ZUJ4 267 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 DMAC1Q96GE9 116 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 TREM1Q9NP99 234 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 MRPL36Q9P0J6 103 aaKnown RBP-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 ADGBQ8N7X0 1667 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 CD109Q6YHK3 1445 aa-1.33□□□□□ -2.62
NCKAP1-204ENST00000477988 FGD6Q6ZV73 1430 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms