RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 C3orf33Q6P1S2 294 aa0.45□□□□□ -2.34
SYCP1-206ENST00000477590 PRR15Q8IV56 129 aa0.45□□□□□ -2.34
SYCP1-206ENST00000477590 OR5H6Q8NGV6 325 aa0.45□□□□□ -2.34
SYCP1-206ENST00000477590 CDC26Q8NHZ8 85 aa0.45□□□□□ -2.34
SYCP1-206ENST00000477590 YTHDC2Q9H6S0 1430 aaKnown RBP0.45□□□□□ -2.34
SYCP1-206ENST00000477590 NDUFA6P56556 154 aa0.44□□□□□ -2.34
SYCP1-206ENST00000477590 ANGPTL5Q86XS5 388 aa0.44□□□□□ -2.34
SYCP1-206ENST00000477590 HOPXQ9BPY8 73 aaPredicted RBP0.44□□□□□ -2.34
SYCP1-206ENST00000477590 IL20Q9NYY1 176 aa0.44□□□□□ -2.34
SYCP1-206ENST00000477590 ADGBQ8N7X0 1667 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 PRORSD1PA6NEY8 169 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 IGHV3-30P01768 117 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 IGHV3-30-5P0DP03 117 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 TPT1P13693 172 aaKnown RBP0.43□□□□□ -2.34
SYCP1-206ENST00000477590 RPS3P23396 243 aaKnown RBP eCLIP0.43□□□□□ -2.34
SYCP1-206ENST00000477590 TRIQKQ629K1 86 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 CARD19Q96LW7 228 aa0.43□□□□□ -2.34
SYCP1-206ENST00000477590 CACNA1EQ15878 2313 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 TECPR2O15040 1411 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 TRAPPC8Q9Y2L5 1435 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 TRDV1A0A1B0GX56 115 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 BBIP1A8MTZ0 92 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 PFDN1O60925 122 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 SNRPD3P62318 126 aaKnown RBP0.42□□□□□ -2.34
SYCP1-206ENST00000477590 DCUN1D2Q6PH85 259 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 CCL4L1Q8NHW4 92 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 DIRC1Q969H9 104 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 PRELID3AQ96N28 172 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 CIB3Q96Q77 187 aaPredicted RBP0.42□□□□□ -2.34
SYCP1-206ENST00000477590 LPAR5Q9H1C0 372 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 LRTM1Q9HBL6 345 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
SYCP1-206ENST00000477590 PPP5D1E7EU14 171 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 GABARAPH6UMI1 98 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 SDC2P34741 201 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 C3orf62Q6ZUJ4 267 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 CLEC2BQ92478 149 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 BOLA2Q9H3K6 86 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 TAF9BQ9HBM6 251 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 LAMTOR2Q9Y2Q5 125 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 BCORL1Q5H9F3 1711 aa0.41□□□□□ -2.34
SYCP1-206ENST00000477590 LOC285556D6RIA3 1793 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 MAP1LC3B2A6NCE7 125 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 ARL5CA6NH57 179 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 A6NN06 94 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 TMEM238C9JI98 176 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 XAF1Q6GPH4 301 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.4□□□□□ -2.35
SYCP1-206ENST00000477590 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
SYCP1-206ENST00000477590 LOC107984156A0A0G2JMH3 177 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 E5RI56 91 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 GYPBP06028 91 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 BCL2P10415 239 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 CRYBA4P53673 196 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 MAXP61244 160 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 SPINK13Q1W4C9 94 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 ARL17AQ8IVW1 177 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 CCDC32Q9BV29 185 aa0.39□□□□□ -2.35
SYCP1-206ENST00000477590 DSPPQ9NZW4 1301 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 MYH3P11055 1940 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 SYNMO15061 1565 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 SAA1P0DJI8 122 aaPredicted RBP0.38□□□□□ -2.35
SYCP1-206ENST00000477590 S100A11P31949 105 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 C10orf99Q6UWK7 81 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 TCTEX1D1Q8N7M0 179 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 TMEM229BQ8NBD8 167 aa0.38□□□□□ -2.35
SYCP1-206ENST00000477590 ROCK1Q13464 1354 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 A0A1W2PPB8 328 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 A0A1W2PRS3 328 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 KIR3DP1A8MWS1 328 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 SPINK6Q6UWN8 80 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 IZUMO2Q6UXV1 221 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 LINC00305Q7Z4B0 112 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 STX12Q86Y82 276 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 KNTC1P50748 2209 aa0.37□□□□□ -2.35
SYCP1-206ENST00000477590 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 H7BYZ3 331 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 LY6G6CO95867 125 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 EVI2AP22794 236 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 G0S2P27469 103 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 DNAJB13P59910 316 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 TNCP24821 2201 aa0.36□□□□□ -2.35
SYCP1-206ENST00000477590 KMT2DO14686 5537 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 DLC1Q96QB1 1528 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 GLYATL3Q5SZD4 288 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 CSAG1Q6PB30 78 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 TEX29Q8N6K0 151 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 LXNQ9BS40 222 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 FKBP11Q9NYL4 201 aa0.35□□□□□ -2.35
SYCP1-206ENST00000477590 ANKRD31Q8N7Z5 1873 aa0.34□□□□□ -2.36
SYCP1-206ENST00000477590 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
SYCP1-206ENST00000477590 FGD6Q6ZV73 1430 aa0.33□□□□□ -2.36
SYCP1-206ENST00000477590 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
SYCP1-206ENST00000477590 TRAV13-1A0A0B4J241 112 aa0.33□□□□□ -2.36
SYCP1-206ENST00000477590 TRBV27A0A0K0K1C4 114 aa0.33□□□□□ -2.36
SYCP1-206ENST00000477590 GNG10P50151 68 aa0.33□□□□□ -2.36
SYCP1-206ENST00000477590 CCSMST1Q4G0I0 132 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms