RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SPCS1Q9Y6A9 102 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 ICE1Q9Y2F5 2266 aa10.59□□□□□ -0.71
HLA-DMA-208ENST00000477541 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
HLA-DMA-208ENST00000477541 TAL2Q16559 108 aa10.59□□□□□ -0.71
HLA-DMA-208ENST00000477541 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
HLA-DMA-208ENST00000477541 PPIAL4CA0A0B4J2A2 164 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 M0R3E3 92 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 NPYP01303 97 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 PPIAL4GP0DN37 164 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 TWIST1Q15672 202 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 Q71RC1 249 aaPredicted RBP10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 ARFGEF3Q5TH69 2177 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 PRSS47A8MTI9 375 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 SNAI2O43623 268 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 GFRALQ6UXV0 394 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 LY6G5BQ8NDX9 201 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
HLA-DMA-208ENST00000477541 SVILO95425 2214 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 FABP5P3A8MUU1 101 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 E7EQL1 145 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 EGR2P11161 476 aaPredicted RBP10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 SCGB1A1P11684 91 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 NMUP48645 174 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 ODF1Q14990 250 aa10.57□□□□□ -0.72
HLA-DMA-208ENST00000477541 TIMM23O14925 209 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 FOXE3Q13461 319 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 CFHR4Q92496 578 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 RNF185Q96GF1 192 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 C21orf62Q9NYP8 219 aa10.56□□□□□ -0.72
HLA-DMA-208ENST00000477541 OOSP1A8MZH6 123 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 ZNF207O43670 478 aaKnown RBP10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 SAP30O75446 220 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 IGKCP01834 107 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 UCNP55089 124 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 Q8N8P6 123 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 ASCL2Q99929 193 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 SPTAN1Q13813 2472 aaKnown RBP10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 TMSB15BA0A087X1C1 80 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 LINC01619G3V211 115 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 M0R1W7 72 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 KLK10O43240 276 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 DPM2O94777 84 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 COX7A1P24310 79 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 FANCD2OSQ96PS1 177 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
HLA-DMA-208ENST00000477541 TMEM238C9JI98 176 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 TNFRSF6BO95407 300 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 CD3EP07766 207 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 LEPP41159 167 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 LY6DQ14210 128 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 KLK9Q2XQG4 91 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 CCDC144NLQ6NUI1 221 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 ARPC1AQ92747 370 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 CHAC1Q9BUX1 264 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 KLK9Q9UKQ9 250 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 HHLA3Q9XRX5 114 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 DOPEY2Q9Y3R5 2298 aa10.54□□□□□ -0.72
HLA-DMA-208ENST00000477541 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 F8W735 103 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 J3QR89 54 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 BCL6BQ8N143 479 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 SLC50A1Q9BRV3 221 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 FLNCQ14315 2725 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 ODF3BA8MYP8 253 aa10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 KLF17Q5JT82 389 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-208ENST00000477541 F8W1H4 67 aa10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 IL17RELQ6ZVW7 336 aa10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 CEND1Q8N111 149 aa10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 VGLL1Q99990 258 aa10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
HLA-DMA-208ENST00000477541 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 ORM1P02763 201 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 PRSS1P07477 247 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 GCSHP23434 173 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 PLNP26678 52 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 EBI3Q14213 229 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 ONECUT1Q9UBC0 465 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 NBPF19A0A087WUL8 3843 aa10.51□□□□□ -0.73
HLA-DMA-208ENST00000477541 NOTCH2Q04721 2471 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms