RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 K7ERJ3 54 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 M0R129 80 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 GEMIN2O14893 280 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LEPROTO15243 131 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 NDUFB3O43676 98 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 OR1I1O60431 355 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 KLF7O75840 302 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SNAPC5O75971 98 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CRPP02741 224 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SPINK8P0C7L1 97 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 TRGC1P0CF51 173 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 PYYP10082 97 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CRYGAP11844 174 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 DEFA4P12838 97 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 HLA-DRB4P13762 266 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 HLA-DMBP28068 263 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 ZNF93P35789 620 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CSN1S1P47710 185 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 ARPP19P56211 112 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 TPPP2P59282 170 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 YPEL3P61236 119 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SNRPD3P62318 126 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 HIST1H4AP62805 103 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 RPL30P62888 115 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 DCDP81605 110 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 RPL18Q07020 188 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SPANXN3Q5MJ09 141 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 C7orf65Q6ZTY9 151 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 GTF2H5Q6ZYL4 71 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 FP248Q71RG6 208 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LINC00471Q8N535 108 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 OTOSQ8NHW6 89 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LSM10Q969L4 123 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LINC00526Q96FQ7 95 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 PRELID3AQ96N28 172 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CIB3Q96Q77 187 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SPANXDQ9BXN6 97 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 AGPAT4-IT1Q9H0P7 198 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CYSTM1Q9H1C7 97 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 SLC35B3Q9H1N7 401 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 PRO1933Q9H354 126 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 RERGLQ9H628 205 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 XAGE1AQ9HD64 81 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 MED9Q9NWA0 146 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LSM2Q9Y333 95 aaKnown RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CHCHD2Q9Y6H1 151 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 HLA-DRB4X5D2U9 266 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 COL1A1P02452 1464 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-208ENST00000477447 TEX14Q8IWB6 1497 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 CEP164Q9UPV0 1460 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 ADGRB1O14514 1584 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 DNMBPQ6XZF7 1577 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 LAMB2P55268 1798 aa0.9□□□□□ -2.27
TARDBP-208ENST00000477447 RRBP1Q9P2E9 1410 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 NISCHQ9Y2I1 1504 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 PHLPP1O60346 1717 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 QRICH2Q9H0J4 1663 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 GLI3P10071 1580 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 MED1Q15648 1581 aaPredicted RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 KTN1Q86UP2 1357 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 PNMA8CA0A1B0GUJ8 204 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 A0A1W2PRS3 328 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 TCRBV3S1A0A5B6 114 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 A6NN06 94 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 OOSP1A8MZH6 123 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 TMEM262E9PQX1 116 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 H7C2G1 150 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 M0R2P5 195 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 MRPS14O60783 128 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 HIST1H2BKO60814 126 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 IGHV3-7P01780 117 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 HBDP02042 147 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 MT-ATP8P03928 68 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CD3DP04234 171 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 HIST1H2BJP06899 126 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 IGLC1P0CG04 106 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 IFITM1P13164 125 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CCL4P13236 92 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 S100A4P26447 101 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 SRP14P37108 136 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 UBA52P62987 128 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 EIF5AP63241 154 aaKnown RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 AKR1C1Q04828 323 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 KLRD1Q13241 179 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 NNATQ16517 81 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 SPRNQ5BIV9 151 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CLLU1Q5K131 121 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 FAM74A1Q5RGS3 127 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 Q6ZS92 163 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 Q6ZUT4 128 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 MIR17HGQ75NE6 70 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 HIST3H2BBQ8N257 126 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 OR4B1Q8NGF8 309 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 PFN4Q8NHR9 129 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CCL4L1Q8NHW4 92 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 YPEL2Q96QA6 119 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 HIST1H2BLQ99880 126 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 RETNLBQ9BQ08 111 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 BCL2L10Q9HD36 194 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 TRPM1Q7Z4N2 1603 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms