RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SFTA2Q6UW10 78 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 C5orf38Q86SI9 138 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 MDP1Q86V88 176 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 WDR31Q8NA23 367 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 BORCS8Q96FH0 119 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 PRR25Q96S07 402 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 UPK3BQ9BT76 320 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 RPP21Q9H633 154 aaKnown RBP3.24□□□□□ -1.89
CD55-208ENST00000476590 C16orf95Q9H693 158 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 TRBV10-2A0A0K0K1G8 114 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 INS-IGF2F8WCM5 200 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 IGF1P05019 195 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 ZNF883P0CG24 379 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 SLC25A16P16260 332 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 HMGA1P17096 107 aaKnown RBP3.24□□□□□ -1.89
CD55-208ENST00000476590 IFI27P40305 119 aaPredicted RBP3.24□□□□□ -1.89
CD55-208ENST00000476590 GFERP55789 205 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 ATXN8Q156A1 80 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 MIC13Q5XKP0 118 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 NDUFA11Q86Y39 141 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 ZCCHC24Q8N2G6 241 aaKnown RBP3.24□□□□□ -1.89
CD55-208ENST00000476590 SERP2Q8N6R1 65 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 THAP8Q8NA92 274 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 SSMEM1Q8WWF3 244 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 PGLYRP4Q96LB8 373 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 RTL8AQ9BWD3 113 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 PRSS22Q9GZN4 317 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
CD55-208ENST00000476590 COL4A2P08572 1712 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 AGRNO00468 2067 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 ARHGEF17Q96PE2 2063 aaPredicted RBP3.23□□□□□ -1.89
CD55-208ENST00000476590 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.23□□□□□ -1.89
CD55-208ENST00000476590 C4orf51C9J302 202 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 F5H697 171 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 H3BT86 120 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 LOXL1Q08397 574 aaPredicted RBP3.23□□□□□ -1.89
CD55-208ENST00000476590 ZNF542PQ5EBM4 170 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 IGFL2Q6UWQ7 119 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 C22orf34Q6ZV56 151 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 KLHDC9Q8NEP7 349 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 C7orf69Q9H7B7 122 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 ZNF492Q9P255 531 aa3.23□□□□□ -1.89
CD55-208ENST00000476590 TRAV26-2A0A0B4J265 109 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 TRAV41A0A0B4J266 112 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 LILRA5A6NI73 299 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 P01737 135 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 ELANEP08246 267 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 DLX1P56177 255 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 PAX8Q06710 450 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 RIGQ13278 110 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 Q6ZPA2 131 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 COPS9Q8WXC6 57 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 TMEM190Q8WZ59 177 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 RPP25Q9BUL9 199 aaKnown RBP3.22□□□□□ -1.89
CD55-208ENST00000476590 CXXC4Q9H2H0 198 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 Q9H8V8 135 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 OTORQ9NRC9 128 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 CCL16O15467 120 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 PLAUP00749 431 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 CRIP2P52943 208 aaPredicted RBP3.22□□□□□ -1.89
CD55-208ENST00000476590 PCBD1P61457 104 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 FKBP1AP62942 108 aaKnown RBP3.22□□□□□ -1.89
CD55-208ENST00000476590 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
CD55-208ENST00000476590 FAM201AQ5SY85 155 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 DCAF4L2Q8NA75 395 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 METTL26Q96S19 204 aa3.22□□□□□ -1.89
CD55-208ENST00000476590 ADAMTS9Q9P2N4 1935 aa3.21□□□□□ -1.89
CD55-208ENST00000476590 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.89
CD55-208ENST00000476590 SHANK1Q9Y566 2161 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 TRGV5A0A0B4J1U4 118 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 A0A1B0GUT8 65 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 UPK2O00526 184 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 SCRG1O75711 98 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 IGKV1D-16P01601 117 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 IGLV3-1P01715 115 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 PRSS1P07477 247 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 C2orf82Q6UX34 121 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 Q6ZS46 218 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 MIR17HGQ75NE6 70 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 RNF182Q8N6D2 247 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 LAMTOR3Q9UHA4 124 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 PRO1854Q9UHT4 67 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 AMMECR1Q9Y4X0 333 aaPredicted RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 U3KQK5 164 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 HEATR1Q9H583 2144 aaKnown RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 RAI1Q7Z5J4 1906 aaPredicted RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 COL5A1P20908 1838 aaPredicted RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 WISP2O76076 250 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 STATHP02808 62 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 TCRAP04437 139 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 P0C879 139 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 PLNP26678 52 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 SYNJ2BPP57105 145 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 HILS1P60008 231 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms