RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 TMEM70Q9BUB7 260 aa11.55□□□□□ -0.56
LMNA-213ENST00000473598 MS4A6AQ9H2W1 248 aa11.55□□□□□ -0.56
LMNA-213ENST00000473598 SRD5A1P18405 259 aa11.55□□□□□ -0.56
LMNA-213ENST00000473598 SLAQ13239 276 aa11.55□□□□□ -0.56
LMNA-213ENST00000473598 FAM110DQ8TAY7 271 aaPredicted RBP11.55□□□□□ -0.56
LMNA-213ENST00000473598 SCRT2Q9NQ03 307 aa11.55□□□□□ -0.56
LMNA-213ENST00000473598 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 OR4C46A6NHA9 309 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 G3V318 75 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 M0R2Z0 102 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 SLC17A3O00476 420 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 HSBP1O75506 76 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 IGF1P05019 195 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 C18orf32Q8TCD1 76 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 FANCD2OSQ96PS1 177 aa11.54□□□□□ -0.56
LMNA-213ENST00000473598 A6NDN8 102 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 I3L2K1 104 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 GPR183P32249 361 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
LMNA-213ENST00000473598 C19orf54Q5BKX5 351 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 FAM162BQ5T6X4 162 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 Q6ZS46 218 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 OR2K2Q8NGT1 345 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 V9GYV3 84 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 CXorf1O96002 111 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 TMEM86BQ8N661 226 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 SPATA25Q9BR10 227 aa11.53□□□□□ -0.56
LMNA-213ENST00000473598 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
LMNA-213ENST00000473598 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 K7EIM0 57 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 APCSP02743 223 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 FRMD6-AS1P0C7T7 363 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 KLK9Q2XQG4 91 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 RASL11AQ6T310 242 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 NPIPB3Q92617 1050 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 THYN1Q9P016 225 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.56
LMNA-213ENST00000473598 K7EN84 100 aa11.52□□□□□ -0.57
LMNA-213ENST00000473598 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.57
LMNA-213ENST00000473598 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
LMNA-213ENST00000473598 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.57
LMNA-213ENST00000473598 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
LMNA-213ENST00000473598 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 J3QR89 54 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 TSPAN13O95857 204 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 SPATA31B1PQ5VZV4 182 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
LMNA-213ENST00000473598 K7EQM0 130 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 OR10AG1Q8NH19 301 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
LMNA-213ENST00000473598 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 IGKV1D-37A0A075B6S9 117 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 SPATA12Q7Z6I5 190 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
LMNA-213ENST00000473598 PRSS22Q9GZN4 317 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
LMNA-213ENST00000473598 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.49□□□□□ -0.57
LMNA-213ENST00000473598 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
LMNA-213ENST00000473598 ZNF207O43670 478 aaKnown RBP11.49□□□□□ -0.57
LMNA-213ENST00000473598 OR2J3O76001 311 aa11.49□□□□□ -0.57
LMNA-213ENST00000473598 GCHFRP30047 84 aa11.49□□□□□ -0.57
LMNA-213ENST00000473598 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
LMNA-213ENST00000473598 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
LMNA-213ENST00000473598 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
LMNA-213ENST00000473598 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 DNAJC9-AS1A6NH13 148 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 PRIMA1Q86XR5 153 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 A0A087X0K7 114 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 A0A0G2JLM5 398 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
LMNA-213ENST00000473598 MIR17HGQ75NE6 70 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
LMNA-213ENST00000473598 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 SYS1-DBNDD2H3BUS1 97 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 TRGV9Q99603 122 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 YTHDF2Q9Y5A9 579 aaKnown RBP11.47□□□□□ -0.57
LMNA-213ENST00000473598 TSSC4Q9Y5U2 329 aaPredicted RBP11.47□□□□□ -0.57
LMNA-213ENST00000473598 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 H3BUA1 57 aa11.47□□□□□ -0.57
LMNA-213ENST00000473598 H3BUT2 72 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms