RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MBD3L1Q8WWY6 194 aa1.53□□□□□ -2.17
XRN1-210ENST00000472697 COX14Q96I36 57 aa1.53□□□□□ -2.17
XRN1-210ENST00000472697 CCL19Q99731 98 aa1.53□□□□□ -2.17
XRN1-210ENST00000472697 MUC2Q02817 5179 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 CRYBG3Q68DQ2 2970 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 ZFHX3Q15911 3703 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 LEUTXA8MZ59 168 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 NAPSAO96009 420 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 IGHV1-69P01742 117 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 IGHV3-30-3P0DP02 117 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BOP23527 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 NFYBP25208 207 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BBP33778 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 AQP4P55087 323 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BDP58876 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BCP62807 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 SMCO1Q147U7 214 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST2H2BEQ16778 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 C6orf52Q5T4I8 152 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 ZNF705AQ6ZN79 300 aaPredicted RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 C3orf56Q8N813 242 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 TMEM35BQ8NCS4 154 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 ZNF439Q8NDP4 499 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 OR8J3Q8NGG0 315 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BHQ93079 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 SPIN2AQ99865 258 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BNQ99877 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H2BMQ99879 126 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 SMR3AQ99954 134 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 SPIN2BQ9BPZ2 258 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 COMMD5Q9GZQ3 224 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 C6orf62Q9GZU0 229 aaPredicted RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 TMEM133Q9H2Q1 129 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 HSPE1-MOB4S4R3N1 261 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 BOD1L1Q8NFC6 3051 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 MUC4Q99102 2169 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 IGLV3-12A0A075B6K2 115 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 C3orf84H3BNL1 204 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 BET1O15155 118 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 CYB5BO43169 146 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 TRGC2P03986 189 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 ZNF728P0DKX0 622 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 RPS4Y1P22090 263 aaKnown RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 POLR2HP52434 150 aaKnown RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 TMBIM6P55061 237 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 FOXA1P55317 472 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 WNT4P56705 351 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 LINC00315P59091 139 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 RHOGP84095 191 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 Q5XG85 94 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 EXOSC8Q96B26 276 aaKnown RBP1.52□□□□□ -2.17
XRN1-210ENST00000472697 KLK12Q9UKR0 248 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 CR1P17927 2039 aa1.52□□□□□ -2.17
XRN1-210ENST00000472697 TLN2Q9Y4G6 2542 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 PKD1L1Q8TDX9 2849 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 IGLV3-16A0A075B6K0 115 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 TRAV3A0A0B4J244 114 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 PVALEFA0A1B0GWK0 134 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 TXNDC9O14530 226 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 HMGN1P05114 100 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 UQCRHP07919 91 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 LPAR6P43657 344 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 HIST1H1AQ02539 215 aaPredicted RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 ZNF141Q15928 474 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 LCA10Q71F78 164 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 CLDND2Q8NHS1 167 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 TOMM6Q96B49 74 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 CAPZA3Q96KX2 299 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 REG4Q9BYZ8 158 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 SH3BGRL3Q9H299 93 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 HERC2O95714 4834 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 IGHV3-15A0A0B4J1V0 119 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 DHRS12A0PJE2 317 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 IL4P05112 153 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 DNAH10OSP0CZ25 163 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 PTHLHP12272 177 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 RNASE4P34096 147 aaKnown RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 CD200P41217 278 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 S100A12P80511 92 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 RPL18Q07020 188 aaKnown RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 NEDD8Q15843 81 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 TAF9Q16594 264 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 SMIM21Q3B7S5 101 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 LHFPL1Q86WI0 220 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 OR8A1Q8NGG7 326 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 ZNF418Q8TF45 676 aaPredicted RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 GPR146Q96CH1 333 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 OR8B2Q96RD0 313 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 SMIM3Q9BZL3 60 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 NKX6-2Q9C056 277 aaPredicted RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 RASL12Q9NYN1 266 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 MED31Q9Y3C7 131 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 SONP18583 2426 aaKnown RBP1.51□□□□□ -2.17
XRN1-210ENST00000472697 TENM1Q9UKZ4 2725 aa1.51□□□□□ -2.17
XRN1-210ENST00000472697 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms