RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 LINC01560Q8TB33 94 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 LY6G6EA0A0G2JKS1 128 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 C2orf70A6NJV1 201 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 SLC50A1Q9BRV3 221 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 TOMM7Q9P0U1 55 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 U3KQA8 63 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 TPSG1Q9NRR2 321 aa11.4□□□□□ -0.59
HDAC7-219ENST00000470668 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.59
HDAC7-219ENST00000470668 TRBV25-1A0A075B6N4 114 aa11.39□□□□□ -0.59
HDAC7-219ENST00000470668 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
HDAC7-219ENST00000470668 SRD5A1P18405 259 aa11.39□□□□□ -0.59
HDAC7-219ENST00000470668 GAFA1Q96PS6 74 aa11.39□□□□□ -0.59
HDAC7-219ENST00000470668 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
HDAC7-219ENST00000470668 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 G3V4G9 280 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 M0R2P5 195 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 CNTFRP26992 372 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 DDB2Q92466 427 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 MYO18BQ8IUG5 2567 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 SHANK2-AS3Q9BTD1 123 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 IGHV1-3A0A0C4DH29 117 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 NDPQ00604 133 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 PRADC1Q9BSG0 188 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
HDAC7-219ENST00000470668 PLSCR4Q9NRQ2 329 aa11.37□□□□□ -0.59
HDAC7-219ENST00000470668 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
HDAC7-219ENST00000470668 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
HDAC7-219ENST00000470668 ZNF883P0CG24 379 aa11.37□□□□□ -0.59
HDAC7-219ENST00000470668 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 IGLV2-14P01704 120 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 GATA1P15976 413 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-219ENST00000470668 DIAPH2-AS1Q14236 149 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 C17orf58Q2M2W7 97 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 C2orf66Q6UXQ4 117 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 LYPD1Q8N2G4 141 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 CTRLP40313 264 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 CRYBA4P53673 196 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 CHD7Q9P2D1 2997 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 IGKV1OR2-108A0A075B7D4 117 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 IGLL5B9A064 214 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 SIVA1O15304 175 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 CD28P10747 220 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 ATXN8Q156A1 80 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
HDAC7-219ENST00000470668 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 ABHD17AQ96GS6 310 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 FAM106AQ4KMX7 169 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-219ENST00000470668 OBSL1O75147 1896 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 B9A039 149 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 NPFFO15130 113 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 TCF15Q12870 199 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE12JA6NER3 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE7O76087 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE12FP0CL80 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE12GP0CL81 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE12IP0CL82 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE4Q13068 117 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
HDAC7-219ENST00000470668 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-219ENST00000470668 LTAP01374 205 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE5Q13069 117 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 GAGE6Q13070 117 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 NEGR1Q7Z3B1 354 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 PRR25Q96S07 402 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 SPAG8Q99932 426 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-219ENST00000470668 TANC2Q9HCD6 1990 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 FOXI2Q6ZQN5 318 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 RNASE6Q93091 150 aaKnown RBP11.34□□□□□ -0.59
HDAC7-219ENST00000470668 SPXQ9BT56 116 aa11.34□□□□□ -0.59
HDAC7-219ENST00000470668 A0A087WWL8 130 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 FGF6P10767 208 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 C9orf153Q5TBE3 101 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 Q6ZSR3 168 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 UNC80Q8N2C7 3258 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 SORL1Q92673 2214 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 KLRD1Q13241 179 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 Q8N8P6 123 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 OR11H6Q8NGC7 330 aa11.33□□□□□ -0.6
HDAC7-219ENST00000470668 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-219ENST00000470668 F8VRH5 84 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms