RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 ORM1P02763 201 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 SRIP30626 198 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 RAB31Q13636 194 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 TDRG1Q3Y452 100 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 IBA57Q5T440 356 aaKnown RBP5.98□□□□□ -1.45
XRN1-208ENST00000470537 LINC00305Q7Z4B0 112 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 ZNF546Q86UE3 836 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 OR10P1Q8NGE3 313 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 LINC00477Q96M19 166 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 TXNDC17Q9BRA2 123 aa5.98□□□□□ -1.45
XRN1-208ENST00000470537 MRPL32Q9BYC8 188 aaKnown RBP5.98□□□□□ -1.45
XRN1-208ENST00000470537 RSL24D1Q9UHA3 163 aaKnown RBP5.98□□□□□ -1.45
XRN1-208ENST00000470537 VPS13BQ7Z7G8 4022 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 TRGV4A0A0C4DH28 118 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 C7orf71A4D174 169 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 COX7A2P2O60397 106 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 SPINK4O60575 86 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 PRAF2O60831 178 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 MPDU1O75352 247 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 CRYGDP07320 174 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 NMBP08949 121 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 CRYBA4P53673 196 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 TCL1AP56279 114 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 AP3S2P59780 193 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 Q6ZRG5 221 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 DIRAS2Q96HU8 199 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 VGLL1Q99990 258 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 SLC25A21Q9BQT8 299 aaPredicted RBP5.97□□□□□ -1.45
XRN1-208ENST00000470537 PSENENQ9NZ42 101 aa5.97□□□□□ -1.45
XRN1-208ENST00000470537 H3BP45 60 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 MRPS12O15235 138 aaKnown RBP5.96□□□□□ -1.46
XRN1-208ENST00000470537 ZNF253O75346 499 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 GPX1P07203 203 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 CT45A10P0DMU9 189 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 ZNF415Q09FC8 603 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 C10orf113Q5VZT2 155 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 IQCF2Q8IXL9 164 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 C12orf45Q8N5I9 185 aaPredicted RBP5.96□□□□□ -1.46
XRN1-208ENST00000470537 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 MRPL53Q96EL3 112 aaKnown RBP5.96□□□□□ -1.46
XRN1-208ENST00000470537 SMIM8Q96KF7 97 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 ARPC5LQ9BPX5 153 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 GGACTQ9BVM4 153 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 PRELID1Q9Y255 219 aa5.96□□□□□ -1.46
XRN1-208ENST00000470537 C9JCJ5 164 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 E5RGE8 158 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 SCGB1D2O95969 90 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 OXTP01178 125 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 HOXB5P09067 269 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 PATE2Q6UY27 113 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 Q8N814 137 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 DEDD2Q8WXF8 326 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 TM2D2Q9BX73 214 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 PARD6GQ9BYG4 376 aaPredicted RBP5.95□□□□□ -1.46
XRN1-208ENST00000470537 DNAJC4Q9NNZ3 241 aa5.95□□□□□ -1.46
XRN1-208ENST00000470537 CCDC59Q9P031 241 aaKnown RBP5.95□□□□□ -1.46
XRN1-208ENST00000470537 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 KLLNB2CW77 178 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 PRAC2D3DTV9 90 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 K7EQD1 137 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 CTDSP2O14595 271 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 AGPAT2O15120 278 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 OR4E1P0C645 316 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 IGLC2P0DOY2 106 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 HIST1H1EP10412 219 aaKnown RBP5.94□□□□□ -1.46
XRN1-208ENST00000470537 RNASE4P34096 147 aaKnown RBP5.94□□□□□ -1.46
XRN1-208ENST00000470537 TAS2R30P59541 319 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 RRAS2P62070 204 aaPredicted RBP5.94□□□□□ -1.46
XRN1-208ENST00000470537 CTF1Q16619 201 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 OR1L4Q8NGR5 311 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 SAT2Q96F10 170 aaPredicted RBP5.94□□□□□ -1.46
XRN1-208ENST00000470537 PFDN5Q99471 154 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 SH3BGRL3Q9H299 93 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 MIXL1Q9H2W2 232 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 AAMDCQ9H7C9 122 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 KLF12Q9Y4X4 402 aa5.94□□□□□ -1.46
XRN1-208ENST00000470537 TRAV8-6A0A0B4J262 113 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 LRCOL1A6NCL2 159 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 FABP12A6NFH5 140 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 SFT2D2O95562 160 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 GYPEP15421 78 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 UBE2MP61081 183 aaKnown RBP5.93□□□□□ -1.46
XRN1-208ENST00000470537 SLC38A11Q08AI6 406 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 ASAH1Q13510 395 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 PDE6HQ13956 83 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 TMEM78Q5T7P6 136 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 WFDC10BQ8IUB3 73 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 DYNC2LI1Q8TCX1 351 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 SPXQ9BT56 116 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 SRRQ9GZT4 340 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 SLC25A31Q9H0C2 315 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 RCL1Q9Y2P8 373 aaKnown RBP5.93□□□□□ -1.46
XRN1-208ENST00000470537 TIMM9Q9Y5J7 89 aa5.93□□□□□ -1.46
XRN1-208ENST00000470537 IGHV1OR15-1A0A075B7D0 117 aa5.92□□□□□ -1.46
XRN1-208ENST00000470537 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
XRN1-208ENST00000470537 IBA57-AS1B1ANH7 110 aa5.92□□□□□ -1.46
XRN1-208ENST00000470537 H3BQ15 152 aa5.92□□□□□ -1.46
XRN1-208ENST00000470537 SLC17A3O00476 420 aa5.92□□□□□ -1.46
XRN1-208ENST00000470537 SSSCA1O60232 199 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms