RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ID1P41134 155 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 LINC00322Q6ZN03 302 aaPredicted RBP14.34□□□□□ -0.11
SMC4-209ENST00000468653 WFDC3Q8IUB2 231 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 Q8TAT8 98 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 ZC2HC1AQ96GY0 325 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 C8orf49Q96NF6 230 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 PYGO2Q9BRQ0 406 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 NDFIP1Q9BT67 221 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 BAHCC1Q9P281 2608 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 CCL24O00175 119 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 P01737 135 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 CT45A10P0DMU9 189 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 PRR25Q96S07 402 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 CUBNO60494 3623 aa14.33□□□□□ -0.12
SMC4-209ENST00000468653 C19orf71A6NCJ1 209 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 BTF3L4Q96K17 158 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 MS4A6AQ9H2W1 248 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 C1orf196B1AJZ1 125 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 TFPI2P48307 235 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 TMEM78Q5T7P6 136 aa14.32□□□□□ -0.12
SMC4-209ENST00000468653 OVOL1O14753 267 aa14.31□□□□□ -0.12
SMC4-209ENST00000468653 CA1P00915 261 aaPredicted RBP14.31□□□□□ -0.12
SMC4-209ENST00000468653 FHL3Q13643 280 aa14.31□□□□□ -0.12
SMC4-209ENST00000468653 ADAMTSL5Q6ZMM2 481 aa14.31□□□□□ -0.12
SMC4-209ENST00000468653 DCANP1Q8TF63 244 aa14.31□□□□□ -0.12
SMC4-209ENST00000468653 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
SMC4-209ENST00000468653 RPP21Q9H633 154 aaKnown RBP14.31□□□□□ -0.12
SMC4-209ENST00000468653 TRAV9-1A0A075B6T8 112 aa14.3□□□□□ -0.12
SMC4-209ENST00000468653 TCL1AP56279 114 aa14.3□□□□□ -0.12
SMC4-209ENST00000468653 OR10J6PQ8NGY7 276 aa14.3□□□□□ -0.12
SMC4-209ENST00000468653 SETD2Q9BYW2 2564 aaPredicted RBP14.3□□□□□ -0.12
SMC4-209ENST00000468653 F8P00451 2351 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 SMIM27A0A1W2PRY6 76 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 ZNF138P52744 262 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 C9orf47Q6ZRZ4 202 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 GPR61Q9BZJ8 451 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 CSN3P07498 182 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 ZNF705DP0CH99 300 aaPredicted RBP14.29□□□□□ -0.12
SMC4-209ENST00000468653 ZNF705BP0CI00 300 aaPredicted RBP14.29□□□□□ -0.12
SMC4-209ENST00000468653 RAB5BP61020 215 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 PAFAH1B2P68402 229 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 COX8CQ7Z4L0 72 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 OR4B1Q8NGF8 309 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 DYNLRB2Q8TF09 96 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
SMC4-209ENST00000468653 A0A1B0GUS0 222 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 CRIP1P50238 77 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 NSUN5P1Q3KNT7 163 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 SMUG1Q53HV7 270 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 CT83Q5H943 113 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 ZFP82Q8N141 532 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 TSKUQ8WUA8 353 aa14.28□□□□□ -0.12
SMC4-209ENST00000468653 A8MWL6 223 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 K7EQG2 157 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 TYMSP04818 313 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 SNRPD3P62318 126 aaKnown RBP14.27□□□□□ -0.12
SMC4-209ENST00000468653 FAM162BQ5T6X4 162 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 OR2D3Q8NGH3 330 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 LINC00477Q96M19 166 aa14.27□□□□□ -0.12
SMC4-209ENST00000468653 SETXQ7Z333 2677 aaKnown RBP14.27□□□□□ -0.13
SMC4-209ENST00000468653 RPL19P84098 196 aaKnown RBP14.27□□□□□ -0.13
SMC4-209ENST00000468653 SH2D1AO60880 128 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 TRGC2P03986 189 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 ZNF688P0C7X2 276 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 DEFB1P60022 68 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 HIST1H1AQ02539 215 aaPredicted RBP14.26□□□□□ -0.13
SMC4-209ENST00000468653 RBPMS2Q6ZRY4 209 aaKnown RBP14.26□□□□□ -0.13
SMC4-209ENST00000468653 OR8A1Q8NGG7 326 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 PPP1R14DQ9NXH3 145 aa14.26□□□□□ -0.13
SMC4-209ENST00000468653 SPINK4O60575 86 aa14.25□□□□□ -0.13
SMC4-209ENST00000468653 PSMG4Q5JS54 123 aa14.25□□□□□ -0.13
SMC4-209ENST00000468653 NEU1Q99519 415 aa14.25□□□□□ -0.13
SMC4-209ENST00000468653 NAT8BQ9UHF3 227 aa14.25□□□□□ -0.13
SMC4-209ENST00000468653 IZUMO1RA6ND01 250 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 ADARB2-AS1A8MUL3 147 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 F6UB75 175 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 KRTAP10-3P60369 221 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 NDUFA11Q86Y39 141 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 CYSRT1A8MQ03 144 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 HIGD1CA8MV81 97 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 ZNF80P51504 273 aaPredicted RBP14.24□□□□□ -0.13
SMC4-209ENST00000468653 LENEPQ9Y5L5 61 aa14.24□□□□□ -0.13
SMC4-209ENST00000468653 C2CD3Q4AC94 2353 aa14.23□□□□□ -0.13
SMC4-209ENST00000468653 FABP5P3A8MUU1 101 aa14.23□□□□□ -0.13
SMC4-209ENST00000468653 DEFB114Q30KQ6 69 aa14.23□□□□□ -0.13
SMC4-209ENST00000468653 NUP35Q8NFH5 326 aa14.23□□□□□ -0.13
SMC4-209ENST00000468653 GFRA4Q9GZZ7 299 aa14.23□□□□□ -0.13
SMC4-209ENST00000468653 TMEM189A5PLL7 270 aa14.22□□□□□ -0.13
SMC4-209ENST00000468653 TMEM61Q8N0U2 210 aa14.22□□□□□ -0.13
SMC4-209ENST00000468653 GZMBP10144 247 aa14.22□□□□□ -0.13
SMC4-209ENST00000468653 MRPL54Q6P161 138 aaKnown RBP14.22□□□□□ -0.13
SMC4-209ENST00000468653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.22□□□□□ -0.13
SMC4-209ENST00000468653 TRAV2A0A0B4J234 112 aa14.21□□□□□ -0.13
SMC4-209ENST00000468653 XKRY2A2RUG3 117 aa14.21□□□□□ -0.13
SMC4-209ENST00000468653 FAM231BA6NCW3 169 aa14.21□□□□□ -0.13
SMC4-209ENST00000468653 GTSF1Q8WW33 167 aa14.21□□□□□ -0.13
SMC4-209ENST00000468653 TRAPPC1Q9Y5R8 145 aa14.21□□□□□ -0.13
SMC4-209ENST00000468653 CD300EQ496F6 205 aaPredicted RBP14.2□□□□□ -0.14
SMC4-209ENST00000468653 PGLYRP4Q96LB8 373 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms