RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435		A0A1W2PRX2	142 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	SMIM27	A0A1W2PRY6	76 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	CBLN1	P23435	193 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	CT83	Q5H943	113 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	OR4B1	Q8NGF8	309 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	PRR25	Q96S07	402 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	CITED2	Q99967	270 aa	Predicted RBP	9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	RNF114	Q9Y508	228 aa		9.3	□□□□□ -0.92
HDLBP-231	ENST00000467435	NPIPB6	E9PJ23	425 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	TRGC2	P03986	189 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	TMEM78	Q5T7P6	136 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	COX8C	Q7Z4L0	72 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	OR9G4	Q8NGQ1	327 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	TSKU	Q8WUA8	353 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	GPR61	Q9BZJ8	451 aa		9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	TSSC4	Q9Y5U2	329 aa	Predicted RBP	9.29	□□□□□ -0.92
HDLBP-231	ENST00000467435	SETX	Q7Z333	2677 aa	Known RBP	9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	LOC105371267	A0A1B0GV96	52 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	IZUMO1R	A6ND01	250 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	OVOL1	O14753	267 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	CRLF1	O75462	422 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	ID1	P41134	155 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	ZNF138	P52744	262 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	PROK1	P58294	105 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	RPL19	P84098	196 aa	Known RBP	9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	SMUG1	Q53HV7	270 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	C9orf47	Q6ZRZ4	202 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	WFDC3	Q8IUB2	231 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	OR2D3	Q8NGH3	330 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	DCANP1	Q8TF63	244 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	DLX4	Q92988	240 aa	Predicted RBP	9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	RAX2	Q96IS3	184 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	AGPAT4-IT1	Q9H0P7	198 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	MS4A6A	Q9H2W1	248 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435	NAT8B	Q9UHF3	227 aa		9.28	□□□□□ -0.92
HDLBP-231	ENST00000467435		A8MWL6	223 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	SPINK4	O60575	86 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	SH2D1A	O60880	128 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	TFPI2	P48307	235 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	CRIP1	P50238	77 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	SRSF2	Q01130	221 aa	Known RBP	9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	FHL3	Q13643	280 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	ACTL10	Q5JWF8	245 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	FAM162B	Q5T6X4	162 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	ADAMTSL5	Q6ZMM2	481 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	OR10J6P	Q8NGY7	276 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435	NEU1	Q99519	415 aa		9.27	□□□□□ -0.93
HDLBP-231	ENST00000467435		K7EQG2	157 aa		9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	CCL24	O00175	119 aa		9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	ZNF705D	P0CH99	300 aa	Predicted RBP	9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	ZNF705B	P0CI00	300 aa	Predicted RBP	9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	MRPL54	Q6P161	138 aa	Known RBP	9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	NUP35	Q8NFH5	326 aa		9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	GFRA4	Q9GZZ7	299 aa		9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIVEP2	P31629	2446 aa		9.26	□□□□□ -0.93
HDLBP-231	ENST00000467435	OTOG	Q6ZRI0	2925 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIGD1C	A8MV81	97 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	PHOX2A	O14813	284 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	CSN3	P07498	182 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	ZNF80	P51504	273 aa	Predicted RBP	9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	DEFB1	P60022	68 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H1A	Q02539	215 aa	Predicted RBP	9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	OR8A1	Q8NGG7	326 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	DYNLRB2	Q8TF09	96 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	GTSF1	Q8WW33	167 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	FRZB	Q92765	325 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	PPP1R14D	Q9NXH3	145 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	TRAPPC1	Q9Y5R8	145 aa		9.25	□□□□□ -0.93
HDLBP-231	ENST00000467435	TMEM189	A5PLL7	270 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	FAM231B	A6NCW3	169 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	SNURFL	B1AK76	121 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435		F6UB75	175 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BK	O60814	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	S100A6	P06703	90 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BJ	P06899	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	ZNF688	P0C7X2	276 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	TRGC1	P0CF51	173 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	GZMB	P10144	247 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BO	P23527	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BB	P33778	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BD	P58876	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	SNRPD3	P62318	126 aa	Known RBP	9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BC	P62807	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	PAFAH1B2	P68402	229 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	FABP9	Q0Z7S8	132 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST2H2BE	Q16778	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	COX19	Q49B96	90 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	PSMG4	Q5JS54	123 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	WDR73	Q6P4I2	378 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BH	Q93079	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	LINC00477	Q96M19	166 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BN	Q99877	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	HIST1H2BM	Q99879	126 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	LENEP	Q9Y5L5	61 aa		9.24	□□□□□ -0.93
HDLBP-231	ENST00000467435	FLNB	O75369	2602 aa	Known RBP	9.23	□□□□□ -0.93
HDLBP-231	ENST00000467435	ADARB2-AS1	A8MUL3	147 aa		9.23	□□□□□ -0.93
HDLBP-231	ENST00000467435	FRMD6-AS1	P0C7T7	363 aa		9.23	□□□□□ -0.93
HDLBP-231	ENST00000467435	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.23	□□□□□ -0.93
HDLBP-231	ENST00000467435	ATP5L2	Q7Z4Y8	100 aa		9.23	□□□□□ -0.93

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