RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 FLG2Q5D862 2391 aaPredicted RBP1.21□□□□□ -2.22
VPS13A-209ENST00000467124 PIK3C2AO00443 1686 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 MT-ND4LP03901 98 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 OR8B8Q15620 311 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 CASC2Q6XLA1 102 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 MORN4Q8NDC4 146 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 OR51A4Q8NGJ6 313 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 CCL4L1Q8NHW4 92 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 AMELYQ99218 206 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 ADGRB2O60241 1585 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 CHD3Q12873 2000 aaKnown RBP1.2□□□□□ -2.22
VPS13A-209ENST00000467124 NISCHQ9Y2I1 1504 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 E9PCH4 1651 aa1.2□□□□□ -2.22
VPS13A-209ENST00000467124 ZFC3H1O60293 1989 aaKnown RBP1.19□□□□□ -2.22
VPS13A-209ENST00000467124 ALPK3Q96L96 1907 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 ARL5CA6NH57 179 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 CD14P08571 375 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 SLC25A4P12235 298 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 BLCAPP62952 87 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 FAM135BQ49AJ0 1406 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 ANKRD31Q8N7Z5 1873 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
VPS13A-209ENST00000467124 A2MP01023 1474 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 TCOF1Q13428 1488 aaKnown RBP1.18□□□□□ -2.22
VPS13A-209ENST00000467124 UNC13AQ9UPW8 1703 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.18□□□□□ -2.22
VPS13A-209ENST00000467124 TRBV7-6A0A0J9YX20 115 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 CMPK1P30085 196 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 OR8I2Q8N0Y5 310 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 PLPP5Q8NEB5 264 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 PTPRFP10586 1907 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 MYLKQ15746 1914 aa1.18□□□□□ -2.22
VPS13A-209ENST00000467124 KIAA1107Q9UPP5 1409 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 TRAV36DV7A0A075B6V5 113 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 A0A1B0GW64 132 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 LOC107986453A0A1B0GWG9 222 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 DEGS1O15121 323 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 RPL22P35268 128 aaKnown RBP1.17□□□□□ -2.22
VPS13A-209ENST00000467124 EFNA4P52798 201 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 DEFB115Q30KQ5 88 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 C19orf12Q9NSK7 152 aa1.17□□□□□ -2.22
VPS13A-209ENST00000467124 MYO18AQ92614 2054 aaKnown RBP1.16□□□□□ -2.22
VPS13A-209ENST00000467124 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.16□□□□□ -2.22
VPS13A-209ENST00000467124 IGLV3-32A0A0A0MS00 114 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 HBDP02042 147 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 TCRAP04437 139 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 SLC25A5P05141 298 aaKnown RBP1.16□□□□□ -2.22
VPS13A-209ENST00000467124 PAEPP09466 180 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 PYDC1Q8WXC3 89 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 AP1S3Q96PC3 154 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 AIF1LQ9BQI0 150 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 BATF3Q9NR55 127 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 CALML5Q9NZT1 146 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
VPS13A-209ENST00000467124 DSPPQ9NZW4 1301 aa1.15□□□□□ -2.22
VPS13A-209ENST00000467124 OVOS2A0A0G2JMS6 1433 aa1.15□□□□□ -2.22
VPS13A-209ENST00000467124 SIP14410 1827 aa1.15□□□□□ -2.22
VPS13A-209ENST00000467124 CDC42EP2O14613 210 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 DPM2O94777 84 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 TNFSF15O95150 251 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 IGLV3-1P01715 115 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 SAA1P0DJI8 122 aaPredicted RBP1.15□□□□□ -2.23
VPS13A-209ENST00000467124 SPATA45Q537H7 98 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 OCIAD2Q56VL3 154 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 TMEM244Q5VVB8 128 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 Q5XG85 94 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 GLIPR1L1Q6UWM5 242 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 OR5A2Q8NGI9 324 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 NAT14Q8WUY8 206 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 CIB3Q96Q77 187 aaPredicted RBP1.15□□□□□ -2.23
VPS13A-209ENST00000467124 TANC2Q9HCD6 1990 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 ZCCHC11Q5TAX3 1644 aaKnown RBP1.15□□□□□ -2.23
VPS13A-209ENST00000467124 PHRF1Q9P1Y6 1649 aaKnown RBP1.15□□□□□ -2.23
VPS13A-209ENST00000467124 FGD6Q6ZV73 1430 aa1.15□□□□□ -2.23
VPS13A-209ENST00000467124 EML5Q05BV3 1969 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 FER1L6Q2WGJ9 1857 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 COL1A1P02452 1464 aaPredicted RBP1.14□□□□□ -2.23
VPS13A-209ENST00000467124 C9JAW5 83 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 ARPC5O15511 151 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 EDF1O60869 148 aaKnown RBP1.14□□□□□ -2.23
VPS13A-209ENST00000467124 PRB4P10163 310 aaPredicted RBP1.14□□□□□ -2.23
VPS13A-209ENST00000467124 SRP9P49458 86 aaKnown RBP1.14□□□□□ -2.23
VPS13A-209ENST00000467124 GTF2A1P52655 376 aaPredicted RBP1.14□□□□□ -2.23
VPS13A-209ENST00000467124 FXYD4P59646 89 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 HSD17B12Q53GQ0 312 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 LPAR5Q9H1C0 372 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 JPT1Q9UK76 154 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 HIGD1AQ9Y241 93 aa1.14□□□□□ -2.23
VPS13A-209ENST00000467124 FBN3Q75N90 2809 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 MED12Q93074 2177 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 LOC105371267A0A1B0GV96 52 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 NUPR2A6NF83 97 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 BBIP1A8MTZ0 92 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 PCBD1P61457 104 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 RPS28P62857 69 aaKnown RBP1.13□□□□□ -2.23
VPS13A-209ENST00000467124 PSPHP78330 225 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 CSAG1Q6PB30 78 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 SBSPONQ8IVN8 264 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 OTOSQ8NHW6 89 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms