RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 LEPP41159 167 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 NANOS2P60321 138 aaKnown RBP6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 RANP62826 216 aaKnown RBP6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 RXFP4Q8TDU9 374 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 ACTR3CQ9C0K3 210 aaPredicted RBP6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 CTXND1A0A1B0GTU2 59 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 PLAC8L1A1L4L8 177 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 CXorf65A6NEN9 183 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 DIRC3C9JPN6 131 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 BCL2L11O43521 198 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 CXorf1O96002 111 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 GCHFRP30047 84 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 TAS2R60P59551 318 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 ERCC8Q13216 396 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 KIR3DS1Q14943 382 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 ZNF726P1Q15940 193 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 C12orf74Q32Q52 190 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 TMED6Q8WW62 240 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 VGLL1Q99990 258 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 ZNF492Q9P255 531 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 CELA1Q9UNI1 258 aa6.78□□□□□ -1.32
SDCCAG3-208ENST00000466579 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 C11orf94C9JXX5 98 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 H7BYZ3 331 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 HMGB3O15347 200 aaKnown RBP6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 IGKV2D-40P01614 121 aaPredicted RBP6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 C1QBP02746 253 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 SEC11BP0C7V7 166 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 CSN1S1P47710 185 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMUB2Q71RG4 321 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 STOML3Q8TAV4 291 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 LINC00467Q9BRT7 94 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMEM208Q9BTX3 173 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMEM167BQ9NRX6 74 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 DKK2Q9UBU2 259 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 LENEPQ9Y5L5 61 aa6.77□□□□□ -1.33
SDCCAG3-208ENST00000466579 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 LCE6AA0A183 80 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 KANTRA0A1W2PQU2 76 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 A0A1W2PRE2 83 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 C7orf71A4D174 169 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 PGPA6NDG6 321 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF705GA8MUZ8 300 aaPredicted RBP6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 SPART-AS1P0CW21 52 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF138P52744 262 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 FAM74A1Q5RGS3 127 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 AKR1C8PQ5T2L2 129 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF493Q6ZR52 646 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 Q6ZTC4 211 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 RNASE8Q8TDE3 154 aaKnown RBP6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 LINC01587Q99440 93 aa6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 KLK5Q9Y337 293 aaPredicted RBP6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
SDCCAG3-208ENST00000466579 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 SERTM2A0A1B0GWG4 89 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 UMAD1C9J7I0 102 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 PRM2P04554 102 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 AZU1P20160 251 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 TCTAP57738 103 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 EIF5AP63241 154 aaKnown RBP6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 CD300CQ08708 224 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 LGALSLQ3ZCW2 172 aaPredicted RBP6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 PRR9Q5T870 116 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 FAM222AQ5U5X8 452 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 C5orf17Q8NAS9 161 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 PYGO2Q9BRQ0 406 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
SDCCAG3-208ENST00000466579 TRAV12-3A0A0B4J271 114 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 GGTLC3B5MD39 225 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 AKAP14Q86UN6 197 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 CMTM2Q8TAZ6 248 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 MBD3L1Q8WWY6 194 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 NIPSNAP3BQ9BS92 247 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF471Q9BX82 626 aaPredicted RBP6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 ARL2-SNX15V9GYD0 113 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
SDCCAG3-208ENST00000466579 MAP1LC3B2A6NCE7 125 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 PFDN1O60925 122 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 TCRAP04437 139 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 GPX1P07203 203 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms