RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PHLDA2Q53GA4 152 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 EIF4E3Q8N5X7 224 aaKnown RBP3.67□□□□□ -1.82
NCL-208ENST00000466274 BPIFCQ8NFQ6 507 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 RNASE11Q8TAA1 199 aaKnown RBP3.67□□□□□ -1.82
NCL-208ENST00000466274 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 SLC35E1Q96K37 410 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 TMEM147Q9BVK8 224 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 S100A14Q9HCY8 104 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 MRPL16Q9NX20 251 aaKnown RBP3.67□□□□□ -1.82
NCL-208ENST00000466274 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 HSPB7Q9UBY9 170 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 SSR3Q9UNL2 185 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 RNF24Q9Y225 148 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 KLF12Q9Y4X4 402 aa3.67□□□□□ -1.82
NCL-208ENST00000466274 IGKV1OR2-108A0A075B7D4 117 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 CEBPZOSA8MTT3 80 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 J3KRW8 73 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 PHOX2AO14813 284 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 MYL9P24844 172 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 GPX4P36969 197 aaPredicted RBP3.66□□□□□ -1.82
NCL-208ENST00000466274 VWC2Q2TAL6 325 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 GPR107Q5VW38 600 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 ZFP1Q6P2D0 407 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 DPPA3Q6W0C5 159 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 OR10G4Q8NGN3 311 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 IL22RA2Q969J5 263 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 ODF3Q96PU9 254 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 ACOT13Q9NPJ3 140 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 IFT46Q9NQC8 304 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 KIF25-AS1Q9Y6Z4 181 aa3.66□□□□□ -1.82
NCL-208ENST00000466274 TRAV1-2A0A0B4J238 106 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 A0A0G2JRQ6 117 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 H7C1H1 209 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 CCSO14618 274 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 CIB2O75838 187 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 IGKV1-5P01602 117 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 SLC25A5P05141 298 aaKnown RBP3.65□□□□□ -1.83
NCL-208ENST00000466274 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 CFC1P0CG37 223 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 ORM2P19652 201 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 CXCL2P19875 107 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 RAB3BP20337 219 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 ATP5IP56385 69 aaPredicted RBP3.65□□□□□ -1.83
NCL-208ENST00000466274 TAS2R46P59540 309 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 RPL19P84098 196 aaKnown RBP3.65□□□□□ -1.83
NCL-208ENST00000466274 ZNF664Q8N3J9 261 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 OR5H6Q8NGV6 325 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 ZNF431Q8TF32 576 aaPredicted RBP3.65□□□□□ -1.83
NCL-208ENST00000466274 TRGV9Q99603 122 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 PRADC1Q9BSG0 188 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 OR51M1Q9H341 326 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 C8orf4Q9NR00 106 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.65□□□□□ -1.83
NCL-208ENST00000466274 PSORS1C2Q9UIG4 136 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 ANAPC10Q9UM13 185 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 URGCP-MRPS24S4R325 110 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 U3KQ87 197 aa3.65□□□□□ -1.83
NCL-208ENST00000466274 TRAV18A0A075B6X5 111 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 A0A087X0K7 114 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 A0A0A6YYH2 397 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 C7orf71A4D174 169 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 MEIS3P1A6NDR6 274 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 A6NJ64 397 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 PTGES3LE9PB15 166 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 MPDU1O75352 247 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 HOXB5P09067 269 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 OR10J4P0C629 311 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 SFTA3P0C7M3 94 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 LINC01547P58512 204 aaPredicted RBP3.64□□□□□ -1.83
NCL-208ENST00000466274 TSPAN5P62079 268 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
NCL-208ENST00000466274 ELOBQ15370 118 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 NMSQ5H8A3 153 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 SDIM1Q6ZPB5 146 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 C10orf67Q8IYJ2 551 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 C8orf59Q8N0T1 100 aaPredicted RBP3.64□□□□□ -1.83
NCL-208ENST00000466274 LGI3Q8N145 548 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 OR10G9Q8NGN4 311 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 OR5H2Q8NGV7 314 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 GTSF1Q8WW33 167 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 SLC50A1Q9BRV3 221 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 PARD6GQ9BYG4 376 aaPredicted RBP3.64□□□□□ -1.83
NCL-208ENST00000466274 GTSF1LQ9H1H1 148 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 AUNIPQ9H7T9 357 aa3.64□□□□□ -1.83
NCL-208ENST00000466274 IGKV1D-37A0A075B6S9 117 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 IGHV1OR15-1A0A075B7D0 117 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 TRAV4A0A0B4J268 109 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 PMP2P02689 132 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 Q0VG73 95 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 MLLT11Q13015 90 aaPredicted RBP3.63□□□□□ -1.83
NCL-208ENST00000466274 RAB31Q13636 194 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 CIRBPQ14011 172 aaKnown RBP3.63□□□□□ -1.83
NCL-208ENST00000466274 AARDQ4LEZ3 155 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 C22orf42Q6IC83 251 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 KCNIP4Q6PIL6 250 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 DAZ4Q86SG3 579 aaKnown RBP3.63□□□□□ -1.83
NCL-208ENST00000466274 ARRDC1Q8N5I2 433 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms