RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	TRAV34	A0A0B4J273	112 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	PGPEP1L	A6NFU8	196 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	SNAPIN	O95295	136 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	LTA	P01374	205 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	PRB2	P02812	416 aa	Predicted RBP	6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	CEBPG	P53567	150 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	PSG3	Q16557	428 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	DEFB114	Q30KQ6	69 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	CENPW	Q5EE01	88 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	LCN12	Q6JVE5	192 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	FAM24B	Q8N5W8	94 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	RNF182	Q8N6D2	247 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	LINC00482	Q8N8I6	264 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	TMEM75	Q8N9X5	138 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	OCC1	Q8TAD7	63 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	MS4A6A	Q9H2W1	248 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	AAMDC	Q9H7C9	122 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627	CLEC5A	Q9NY25	188 aa		6.59	□□□□□ -1.35
UBA3-208	ENST00000465627		A0A087WWC5	75 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	TRAV8-1	A0A0A6YYK1	113 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	TRAV2	A0A0B4J234	112 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	SERTM2	A0A1B0GWG4	89 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	C7orf77	A4D0Y5	90 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	RBAKDN	A6NC62	111 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	ZNF705F	A8MVS1	300 aa	Predicted RBP	6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	OVOL1	O14753	267 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	TSPAN4	O14817	238 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	SCO1	O75880	301 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	S100A9	P06702	114 aa	Known RBP	6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	BMI1	P35226	326 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	AKR1C3	P42330	323 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	CNN1	P51911	297 aa	Known RBP	6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	RHEB	Q15382	184 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	ZNF674	Q2M3X9	581 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	NSUN5P1	Q3KNT7	163 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	GOLT1A	Q6ZVE7	132 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627		Q86TA4	180 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	ISOC2	Q96AB3	205 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	SMIM12	Q96EX1	92 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	FMC1	Q96HJ9	113 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	PPP1R14D	Q9NXH3	145 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	SELENOK	Q9Y6D0	94 aa		6.58	□□□□□ -1.36
UBA3-208	ENST00000465627	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627		B4DEV8	164 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	DNASE2	O00115	360 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	EIF4EBP3	O60516	100 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	GCG	P01275	180 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	IGKV2D-40	P01614	121 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	SAMD13	Q5VXD3	122 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	C9orf47	Q6ZRZ4	202 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	TMEM61	Q8N0U2	210 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	YPEL4	Q96NS1	127 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	VGLL1	Q99990	258 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	DNAH3	Q8TD57	4116 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	CSMD3	Q7Z407	3707 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	TRAV25	A0A0B4J276	109 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	IZUMO1R	A6ND01	250 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	FBLL1	A6NHQ2	334 aa	Known RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627		A8MTW9	85 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	NPIPB6	E9PJ23	425 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	IGLV1-51	P01701	117 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	PRB4	P10163	310 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	GNG4	P50150	75 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	FLI1	Q01543	452 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	LINC00322	Q6ZN03	302 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	TMEM183A	Q8IXX5	376 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	CMTM2	Q8TAZ6	248 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	C16orf92	Q96LL3	132 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	FAM19A4	Q96LR4	140 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	SGK494	Q96LW2	274 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	AGPAT4-IT1	Q9H0P7	198 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	TMEM242	Q9NWH2	141 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	PSG8	Q9UQ74	426 aa		6.57	□□□□□ -1.36
UBA3-208	ENST00000465627	DNAH9	Q9NYC9	4486 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	C19orf71	A6NCJ1	209 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627		M0QZ24	198 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	CSN1S1	P47710	185 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	CRIP1	P50238	77 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	DEFB1	P60022	68 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	ADIRF	Q15847	76 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	RNF212	Q495C1	297 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	CD300E	Q496F6	205 aa	Predicted RBP	6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	CDPF1	Q6NVV7	123 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	BAGE2	Q86Y30	109 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	GBGT1	Q8N5D6	347 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	PRR25	Q96S07	402 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	GPR61	Q9BZJ8	451 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	TUBA4B	Q9H853	241 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	RPH3AL	Q9UNE2	315 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	ZFP30	Q9Y2G7	519 aa		6.56	□□□□□ -1.36
UBA3-208	ENST00000465627	IGKV3-7	A0A075B6H7	116 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627		M0R036	132 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	UBE2G1	P62253	170 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	ERCC8	Q13216	396 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	OR5I1	Q13606	314 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	FAM231D	Q6ZW35	169 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	ZNF575	Q86XF7	245 aa		6.55	□□□□□ -1.36
UBA3-208	ENST00000465627	APRG1	Q8IVJ8	170 aa		6.55	□□□□□ -1.36

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