RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 DAZAP2Q15038 168 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 TAL2Q16559 108 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 Q1RN00 199 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 MORN5Q5VZ52 161 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 PLXDC1Q8IUK5 500 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 ZNRF2Q8NHG8 242 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 SRSF12Q8WXF0 261 aaKnown RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 FAM19A4Q96LR4 140 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 C2orf48Q96LS8 159 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 CCL26Q9Y258 94 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 PYGO1Q9Y3Y4 419 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 SETXQ7Z333 2677 aaKnown RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 TRAV13-1A0A0B4J241 112 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-64DA0A0J9YX35 117 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF22P17026 224 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 PFN2P35080 140 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 UBE2D3P61077 147 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 UBE2D2P62837 147 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 C1orf195Q5TG92 126 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF329Q86UD4 541 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 MYOZ3Q8TDC0 251 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 RNF138Q8WVD3 245 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 SLC25A39Q9BZJ4 359 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 PLA2G2FQ9BZM2 168 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 MRPL35Q9NZE8 188 aaKnown RBP2.83□□□□□ -1.96
COL8A1-205ENST00000463753 AGRNO00468 2067 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A10PA6NDY2 464 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A24PP0C7X0 464 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 C8orf88P0DMB2 117 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 RIGQ13278 110 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 C16orf47Q6ZP98 133 aaPredicted RBP2.82□□□□□ -1.96
COL8A1-205ENST00000463753 TMEM86BQ8N661 226 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 SAP25Q8TEE9 199 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 TSACCQ96A04 125 aaPredicted RBP2.82□□□□□ -1.96
COL8A1-205ENST00000463753 SLC25A10Q9UBX3 287 aaPredicted RBP2.82□□□□□ -1.96
COL8A1-205ENST00000463753 BRWD1Q9NSI6 2320 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3OR15-7A0A075B7D8 119 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 C19orf71A6NCJ1 209 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 PGPA6NDG6 321 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A20PA6NIJ5 464 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 DEFB108AA8MXU0 73 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 FCGR3BO75015 233 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGLV3-1P01715 115 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IFI6P09912 130 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 CKS2P33552 79 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 KRTAP27-1Q3LI81 207 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 LY6G5CQ5SRR4 150 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 Q71RC1 249 aaPredicted RBP2.82□□□□□ -1.96
COL8A1-205ENST00000463753 ORMDL3Q8N138 153 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 MDS2Q8NDY4 140 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 ITLN1Q8WWA0 313 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 COX14Q96I36 57 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 VKORC1Q9BQB6 163 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 PAXXQ9BUH6 204 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 RETNQ9HD89 108 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF407Q9C0G0 2248 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 FBN2P35556 2912 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGSF10Q6WRI0 2623 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-15A0A0B4J1V0 119 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-43A0A0B4J1X8 118 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 NPIPB13A6NJU9 1138 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF815PA8K554 130 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 NPIPB4C9JG80 1138 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 LGALS9O00182 355 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-13P01766 116 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 CRYGDP07320 174 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-43DP0DP04 118 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 COX7CP15954 63 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 SLC25A16P16260 332 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 SSR4P51571 173 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 MLANAQ16655 118 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 TEX36Q5VZQ5 186 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 Q6P435 159 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 FOXL2NBQ6ZUU3 175 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 PRNTQ86SH4 94 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 SBSPONQ8IVN8 264 aa2.82□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV1OR15-9A0A0B4J2B8 117 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 J3QQQ9 107 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 COX7A2P2O60397 106 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-48P01763 117 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 CRYGBP07316 175 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 LGALS1P09382 135 aaKnown RBP2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FGF12P61328 243 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 CIRBPQ14011 172 aaKnown RBP2.81□□□□□ -1.96
COL8A1-205ENST00000463753 TMEM170BQ5T4T1 132 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 NDUFA11Q86Y39 141 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 POM121L12Q8N7R1 296 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00482Q8N8I6 264 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 C8orf31Q8N9H6 132 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 CCL4L1Q8NHW4 92 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 PLEKHB2Q96CS7 222 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 SLC25A2Q9BXI2 301 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms