RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 LAMB4A4D0S4 1761 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 MYH3P11055 1940 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 PIEZO2Q9H5I5 2752 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 C2orf70A6NJV1 201 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 C5orf58C9J3I9 102 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 J3QR89 54 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 K7ERJ3 54 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 SULT1C4O75897 302 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 NCR2O95944 276 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 CRPP02741 224 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 CIRBPQ14011 172 aaKnown RBP1.8□□□□□ -2.12
HERC4-208ENST00000463478 Q5XG85 94 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 FP248Q71RG6 208 aaPredicted RBP1.8□□□□□ -2.12
HERC4-208ENST00000463478 ARPINQ7Z6K5 226 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 COA5Q86WW8 74 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 C1orf54Q8WWF1 131 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 CALML5Q9NZT1 146 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 OBSL1O75147 1896 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 HTTP42858 3142 aa1.8□□□□□ -2.12
HERC4-208ENST00000463478 A0A096LPI6 279 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 TRAV3A0A0B4J244 114 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 LOC107986453A0A1B0GWG9 222 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 SMIM24O75264 130 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 HYPMO75409 117 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 IGLV1-51P01701 117 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 TRACP01848 142 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 TSPAN19P0C672 248 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 CRYGSP22914 178 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 CCSMST1Q4G0I0 132 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 C1orf137Q5JT78 98 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 GLIPR1L1Q6UWM5 242 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 TMEM14EPQ6UXP3 125 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 Q8N814 137 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 OR8J3Q8NGG0 315 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 RNASE11Q8TAA1 199 aaKnown RBP1.79□□□□□ -2.12
HERC4-208ENST00000463478 AP1S3Q96PC3 154 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 OR4C12Q96R67 309 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 DISP2A7MBM2 1401 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 TCOF1Q13428 1488 aaKnown RBP1.79□□□□□ -2.12
HERC4-208ENST00000463478 GREB1Q4ZG55 1949 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 KIAA2026Q5HYC2 2103 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 MTORP42345 2549 aa1.79□□□□□ -2.12
HERC4-208ENST00000463478 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 GLI3P10071 1580 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 SOGA1O94964 1423 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 TRAV10A0A0B4J240 114 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 PNMA8CA0A1B0GUJ8 204 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 M0R2Z0 102 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 TPST1O60507 370 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 YPEL1O60688 119 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 MRPS14O60783 128 aaKnown RBP1.78□□□□□ -2.12
HERC4-208ENST00000463478 FOXA3P55318 350 aaPredicted RBP1.78□□□□□ -2.12
HERC4-208ENST00000463478 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 CNBPP62633 177 aaKnown RBP1.78□□□□□ -2.12
HERC4-208ENST00000463478 OR5AS1Q8N127 324 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 OR10AG1Q8NH19 301 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 BRK1Q8WUW1 75 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 RAB37Q96AX2 223 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 FAM107BQ9H098 131 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
HERC4-208ENST00000463478 CHCHD2Q9Y6H1 151 aaPredicted RBP1.78□□□□□ -2.12
HERC4-208ENST00000463478 DSPPQ9NZW4 1301 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 A0A1B0GW64 132 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 NDUFA2O43678 99 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 HBDP02042 147 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 CCL4P13236 92 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 HIST1H1BP16401 226 aaKnown RBP1.77□□□□□ -2.13
HERC4-208ENST00000463478 ETV6P41212 452 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 HIST1H1AQ02539 215 aaPredicted RBP1.77□□□□□ -2.13
HERC4-208ENST00000463478 HSD17B12Q53GQ0 312 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 C10orf55Q5SWW7 151 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 C1orf134Q5TEV5 83 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 TMEM244Q5VVB8 128 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 OR4C6Q8NH72 309 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 OR5AK2Q8NH90 309 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 U3KQ87 197 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 ARHGAP32A7KAX9 2087 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 SPTA1P02549 2419 aa1.77□□□□□ -2.13
HERC4-208ENST00000463478 IGKV2D-26A0A0A0MRZ7 120 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 K7EP13 123 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 CXCL8P10145 99 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 DEFB103AP81534 67 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 ZNF833PQ6ZTB9 187 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 OR10AC1Q8NH08 325 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 PSMF1Q92530 271 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 Q96M85 177 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 CST11Q9H112 138 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 FRMPD1Q5SYB0 1578 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 DOCK4Q8N1I0 1966 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
HERC4-208ENST00000463478 ERCC6Q03468 1493 aa1.75□□□□□ -2.13
HERC4-208ENST00000463478 CPAMD8Q8IZJ3 1885 aa1.75□□□□□ -2.13
HERC4-208ENST00000463478 KIF13AQ9H1H9 1805 aa1.75□□□□□ -2.13
HERC4-208ENST00000463478 MPDZO75970 2070 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms