RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 FOXI2Q6ZQN5 318 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 ARL17AQ8IVW1 177 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 OR8J3Q8NGG0 315 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 TCEAL4Q96EI5 215 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 CYSTM1Q9H1C7 97 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 COL4A1P02462 1669 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 KDM5CP41229 1560 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV2-40A0A087WW87 121 aaPredicted RBP1.49□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV2D-40P01614 121 aaPredicted RBP1.49□□□□□ -2.17
GPNMB-205ENST00000463011 PCBD1P61457 104 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 GLIPR1L1Q6UWM5 242 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 TSTD1Q8NFU3 115 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 OR4S1Q8NGB4 309 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 MAGOHBQ96A72 148 aaKnown RBP1.49□□□□□ -2.17
GPNMB-205ENST00000463011 FER1L6Q2WGJ9 1857 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 COL1A1P02452 1464 aaPredicted RBP1.49□□□□□ -2.17
GPNMB-205ENST00000463011 CECR2Q9BXF3 1484 aa1.49□□□□□ -2.17
GPNMB-205ENST00000463011 CPDO75976 1380 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 DOCK10Q96BY6 2186 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV3-7A0A075B6H7 116 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 TRBV6-7A0A0A0MS04 114 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV2-29A2NJV5 120 aaPredicted RBP1.48□□□□□ -2.17
GPNMB-205ENST00000463011 ZNF727A8MUV8 499 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 CCL25O15444 150 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 SMIM24O75264 130 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 CCL4P13236 92 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 HIST1H1BP16401 226 aaKnown RBP1.48□□□□□ -2.17
GPNMB-205ENST00000463011 ZNF25P17030 456 aaPredicted RBP1.48□□□□□ -2.17
GPNMB-205ENST00000463011 CKS2P33552 79 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 QRFPP83859 136 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 DEFB115Q30KQ5 88 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 CCDC58Q4VC31 144 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 OTOSQ8NHW6 89 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 PFDN5Q99471 154 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
GPNMB-205ENST00000463011 SYNJ1O43426 1573 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 MYH10P35580 1976 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 BAZ2BQ9UIF8 2168 aaKnown RBP1.47□□□□□ -2.17
GPNMB-205ENST00000463011 LOC110117498A0A087WWA1 95 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 M0R2Z0 102 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 GEMIN2O14893 280 aaKnown RBP1.47□□□□□ -2.17
GPNMB-205ENST00000463011 INE1O15225 51 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 NUPR1O60356 82 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 EDF1O60869 148 aaKnown RBP1.47□□□□□ -2.17
GPNMB-205ENST00000463011 CD14P08571 375 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 EVI2AP22794 236 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 ETV6P41212 452 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 AKR1D1P51857 326 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 NEDD8Q15843 81 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 GLYATL3Q5SZD4 288 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 TMEM91Q6ZNR0 172 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 OBSCN-AS1Q96MR7 158 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 TSC22D3Q99576 134 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 COMMD3Q9UBI1 195 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 TNFSF18Q9UNG2 199 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 ZFP30Q9Y2G7 519 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 OVOS2A0A0J9YW53 1432 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 SOGA1O94964 1423 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 OVOS2Q6IE36 1432 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 FGD6Q6ZV73 1430 aa1.47□□□□□ -2.17
GPNMB-205ENST00000463011 M0R2N4 97 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 KLF7O75840 302 aaPredicted RBP1.46□□□□□ -2.18
GPNMB-205ENST00000463011 PPYP01298 95 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 CD3DP04234 171 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 HLA-DRB4P13762 266 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 CIB3Q96Q77 187 aaPredicted RBP1.46□□□□□ -2.18
GPNMB-205ENST00000463011 TMEM14CQ9P0S9 112 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 METTL1Q9UBP6 276 aaKnown RBP1.46□□□□□ -2.18
GPNMB-205ENST00000463011 MPC1Q9Y5U8 109 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 HLA-DRB4X5D2U9 266 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 ARHGAP31Q2M1Z3 1444 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 MYLKQ15746 1914 aa1.46□□□□□ -2.18
GPNMB-205ENST00000463011 USP54Q70EL1 1684 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 NDUFA2O43678 99 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 IGLC6P0CF74 106 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 KDELR1P24390 212 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 GDF5OSQ5U4N7 250 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 LINC00322Q6ZN03 302 aaPredicted RBP1.45□□□□□ -2.18
GPNMB-205ENST00000463011 MMGT1Q8N4V1 131 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 SMIM7Q9BQ49 75 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 SLC35B3Q9H1N7 401 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 DNAJC15Q9Y5T4 150 aa1.45□□□□□ -2.18
GPNMB-205ENST00000463011 HEATR5BQ9P2D3 2071 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 LAMB2P55268 1798 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 CCDC171Q6TFL3 1326 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 RP1P56715 2156 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 BICRAQ9NZM4 1560 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 IGHV1-24A0A0C4DH33 117 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 PNMA8CA0A1B0GUJ8 204 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 J3QR89 54 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 K7ERU9 68 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 LINC00694P0DN24 101 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 IL9P15248 144 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 CLLU1Q5K131 121 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 C10orf111Q8N326 155 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 DEFB119Q8N690 84 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 C5orf17Q8NAS9 161 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 C10orf105Q8TEF2 133 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms