RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 BAMBIQ13145 260 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 OR8B8Q15620 311 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 DEFB128Q7Z7B8 93 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 CCDC32Q9BV29 185 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 TAF9BQ9HBM6 251 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 MYO18BQ8IUG5 2567 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 VPS13BQ7Z7G8 4022 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 COL12A1Q99715 3063 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 TRBV10-2A0A0K0K1G8 114 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 RTL8CO15255 209 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 AAED1Q7RTV5 226 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 TMEM229BQ8NBD8 167 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 ISOC1Q96CN7 298 aa1.54□□□□□ -2.16
SMC4-203ENST00000462668 DEGS1O15121 323 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 TSPAN19P0C672 248 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 PKD1L2Q7Z442 2459 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 A0A087X0T9 212 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 A0A096LPI6 279 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 NFYAP23511 347 aaPredicted RBP1.53□□□□□ -2.16
SMC4-203ENST00000462668 TPI1P60174 286 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 SLC25A21Q9BQT8 299 aaPredicted RBP1.53□□□□□ -2.16
SMC4-203ENST00000462668 HSPE1-MOB4S4R3N1 261 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 ALMS1Q8TCU4 4167 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 J3QQQ9 107 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 SHBGP04278 402 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 MIFP14174 115 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 ZNF93P35789 620 aaPredicted RBP1.53□□□□□ -2.16
SMC4-203ENST00000462668 KRTAP13-3Q3SY46 172 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 PRR9Q5T870 116 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 HRCT1Q6UXD1 115 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 DUSP21Q9H596 190 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 GSKIPQ9P0R6 139 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 PCTPQ9UKL6 214 aa1.53□□□□□ -2.16
SMC4-203ENST00000462668 PAIP2BQ9ULR5 123 aaKnown RBP1.53□□□□□ -2.16
SMC4-203ENST00000462668 A0A087WSZ3 146 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 IGHV1-18A0A0C4DH31 117 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 IGHV1-58A0A0C4DH39 117 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 C11orf86A6NJI1 115 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 UBE2L6O14933 153 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 PFDN1O60925 122 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 CCL4P13236 92 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 EMP1P54849 157 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 LY6EQ16553 131 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 RTL8BQ17RB0 113 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 ZNF826PQ6ZT77 177 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 SH2D6Q7Z4S9 175 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 HIGD2AQ9BW72 106 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 YIPF3Q9GZM5 350 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 DCHS2Q6V1P9 2916 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 IGLV1-51P01701 117 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 KDELR1P24390 212 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 AKR1C3P42330 323 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 SUPT4H1P63272 117 aaKnown RBP1.52□□□□□ -2.17
SMC4-203ENST00000462668 MEF2BQ02080 365 aaPredicted RBP1.52□□□□□ -2.17
SMC4-203ENST00000462668 TMEM14EPQ6UXP3 125 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 ZNF767PQ75MW2 155 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 NAT14Q8WUY8 206 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 MCTS1Q9ULC4 181 aaKnown RBP1.52□□□□□ -2.17
SMC4-203ENST00000462668 UNC79Q9P2D8 2635 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 TMEM256-PLSCR3K7ERE1 68 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 FAM27BQ5VT28 67 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP26-1Q6PEX3 210 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 ATRXP46100 2492 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 MALRD1Q5VYJ5 2156 aa1.52□□□□□ -2.17
SMC4-203ENST00000462668 NUP214P35658 2090 aaPredicted RBP1.51□□□□□ -2.17
SMC4-203ENST00000462668 BPGMP07738 259 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 QRFPP83859 136 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 ADGRG4Q8IZF6 3080 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 IGKV2-28A0A075B6P5 120 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 IGKV2D-28P01615 120 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 DYNLT3P51808 116 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 RHEBQ15382 184 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 ZNF181Q2M3W8 571 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 ZNF791Q3KP31 576 aaPredicted RBP1.51□□□□□ -2.17
SMC4-203ENST00000462668 HIST3H2BBQ8N257 126 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 PKD1P98161 4303 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 ARL5CA6NH57 179 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 DEFA3P59666 94 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 UBE2BP63146 152 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 OR8D4Q8NGM9 314 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 ACOT12Q8WYK0 555 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 POPDC3Q9HBV1 291 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 CBLN4Q9NTU7 201 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 MINOS1-NBL1R4GNA1 71 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 MYO5AQ9Y4I1 1855 aaKnown RBP1.51□□□□□ -2.17
SMC4-203ENST00000462668 G3V3Q6 166 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 TNFSF15O95150 251 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 C1QCP02747 245 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 MPC1LP0DKB6 136 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 CSRP1P21291 193 aaKnown RBP1.51□□□□□ -2.17
SMC4-203ENST00000462668 TMEM106AQ96A25 262 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 IMMP2LQ96T52 175 aa1.51□□□□□ -2.17
SMC4-203ENST00000462668 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms