RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 B5MCH6 92 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 HOXA3O43365 443 aaPredicted RBP6.33□□□□□ -1.4
ERCC8-204ENST00000462279 CNIH1O95406 144 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 IGHV1-46P01743 117 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 HOXB4P17483 251 aaPredicted RBP6.33□□□□□ -1.4
ERCC8-204ENST00000462279 Q6ZUT4 128 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 MYOZ3Q8TDC0 251 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 FBXL15Q9H469 300 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 PRSS29PA6NIE9 313 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 LINC01548A6NM66 108 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 FHL3Q13643 280 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 PIEZO2Q9H5I5 2752 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 TRAV26-2A0A0B4J265 109 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 LINC01549A6NIU2 74 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 ZNF80P51504 273 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-204ENST00000462279 ZFP2Q6ZN57 461 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 UFC1Q9Y3C8 167 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 SPTBN2O15020 2390 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 OR11H12B2RN74 326 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC8-204ENST00000462279 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 OR11H1Q8NG94 326 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 OR11H2Q8NH07 326 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 CCL17Q92583 94 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 RNF125Q96EQ8 232 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 NXT2Q9NPJ8 142 aaKnown RBP6.32□□□□□ -1.4
ERCC8-204ENST00000462279 SLC25A15Q9Y619 301 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 IGHV3-35A0A0C4DH35 117 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 ATP5LO75964 103 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 GLRXP35754 106 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 C1orf162Q8NEQ5 155 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-204ENST00000462279 NBASA2RRP1 2371 aa6.32□□□□□ -1.4
ERCC8-204ENST00000462279 FAM90A27PA6NNH2 459 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 HLA-DMBP28068 263 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-204ENST00000462279 KLRD1Q13241 179 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 DLX4Q92988 240 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-204ENST00000462279 ARHGAP32A7KAX9 2087 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 A0A1W2PNU3 283 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-204ENST00000462279 CCL11P51671 97 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
ERCC8-204ENST00000462279 MRGPRG-AS1Q2M3A8 158 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-204ENST00000462279 PPP1R27Q86WC6 154 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 PIFOQ8TCI5 191 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 RNF185Q96GF1 192 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 CFAP126Q5VTH2 177 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 LYPD2Q6UXB3 125 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 PRR25Q96S07 402 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 KIR2DL4Q99706 377 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 LINC00574Q9H8X3 128 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 SIGLEC9Q9Y336 463 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
ERCC8-204ENST00000462279 APC2O95996 2303 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 SHISA9B4DS77 424 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 IGHV3-23P01764 117 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-204ENST00000462279 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 DTX2Q86UW9 622 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 CTSZQ9UBR2 303 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 TRBV6-1A0A0K0K1D8 114 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 H3BRN7 92 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 COLQQ9Y215 455 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-204ENST00000462279 ACACAQ13085 2346 aa6.3□□□□□ -1.4
ERCC8-204ENST00000462279 K7EM74 188 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 NDUFB3O43676 98 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 FCN3O75636 299 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TAL2Q16559 108 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TMEM30BQ3MIR4 351 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 SPTA1P02549 2419 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TRBV7-3A0A075B6L6 115 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 MYMXA0A1B0GTQ4 84 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 I3L2K1 104 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TSPAN13O95857 204 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TRGV3P03979 118 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 COX7A1P24310 79 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 LYPD1Q8N2G4 141 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TEX29Q8N6K0 151 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 DEFB104AQ8WTQ1 72 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 IGFBPL1Q8WX77 278 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 TEX22C9J3V5 150 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 SCGB1C2P0DMR2 95 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 PRTN3P24158 256 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 GATA4P43694 442 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 ERCC8Q13216 396 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 SRSF6Q13247 344 aaKnown RBP6.29□□□□□ -1.4
ERCC8-204ENST00000462279 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
ERCC8-204ENST00000462279 A0A087WX48 190 aa6.28□□□□□ -1.4
ERCC8-204ENST00000462279 ZNF815PA8K554 130 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms