RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 Q6Q795 121 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 TRAPPC6BQ86SZ2 158 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 SGPP2Q8IWX5 399 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 CYB561D1Q8N8Q1 229 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 OR5H2Q8NGV7 314 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 MRPL30Q8TCC3 161 aaKnown RBP3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 ADTRPQ96IZ2 230 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 GGTLC1Q9BX51 225 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 TMEM59Q9BXS4 323 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 PECRQ9BY49 303 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 MS4A6AQ9H2W1 248 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 IFI27L2Q9H2X8 130 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF286AQ9HBT8 521 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 MANBALQ9NQG1 85 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 RPRMQ9NS64 109 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 THYN1Q9P016 225 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
ATPAF1-203ENST00000460928 PLXNB1O43157 2135 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 LOC102724200A0A096LPH7 203 aaPredicted RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 FABP5P3A8MUU1 101 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 SNURFLB1AK76 121 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 C12orf77C9JDV5 145 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 H0YJW9 148 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 HMGB3O15347 200 aaKnown RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 PDCD6O75340 191 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CRLF1O75462 422 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 KRASP01116 189 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ORM1P02763 201 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CD3DP04234 171 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 GPX1P07203 203 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 OR9G9P0C7N8 305 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF728P0DKX0 622 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CGB3P0DN86 165 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CGB7P0DN87 165 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 HIST1H1EP10412 219 aaKnown RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 BCL2P10415 239 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CD24P25063 80 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 PAX9P55771 341 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 IZUMO4Q1ZYL8 232 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 HLA-DRB5Q30154 266 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 DEFB112Q30KQ8 113 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF497Q6ZNH5 498 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 Q8IYB0 196 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 VSTM2AQ8TAG5 236 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 TMEM37Q8WXS4 190 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ABHD14BQ96IU4 210 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 SPIN2AQ99865 258 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 SPAG8Q99932 426 aaPredicted RBP3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 SPIN2BQ9BPZ2 258 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 TM2D1Q9BX74 207 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 CST11Q9H112 138 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 ESM1Q9NQ30 184 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 VSIG4Q9Y279 399 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 WASHC3Q9Y3C0 194 aa3.74□□□□□ -1.81
ATPAF1-203ENST00000460928 IGKV1-6A0A0C4DH72 117 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 TMEM30CPA0ZSE6 113 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 C7orf71A4D174 169 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 C17orf98A8MV24 154 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 KBTBD11O94819 623 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 IGHV4-59P01825 116 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 APOA2P02652 100 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 SCTP09683 121 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A6P0DMU7 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A5P0DMU8 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A10P0DMU9 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A7P0DMV0 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 IGHV1-8P0DP01 117 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 FABP2P12104 132 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CRISP2P16562 243 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CRYBB3P26998 211 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 SRIP30626 198 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 SAA4P35542 130 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 PPP1CCP36873 323 aaKnown RBP3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 RPL8P62917 257 aaKnown RBP3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 TNXAQ16473 311 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 LY6EQ16553 131 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A1Q5HYN5 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 SLC25A34Q6PIV7 304 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 PPP1R27Q86WC6 154 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 GVQW1Q8N7I0 195 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CT45A3Q8NHU0 189 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 SGMS2Q8NHU3 365 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 FAM213BQ8TBF2 198 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF502Q8TBZ5 544 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 BORCS7Q96B45 105 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 KCNS1Q96KK3 526 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF714Q96N38 554 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 ASCL2Q99929 193 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 COMMD5Q9GZQ3 224 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 OR2D2Q9H210 308 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 CALYQ9NYX4 217 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 OR1A1Q9P1Q5 309 aa3.73□□□□□ -1.81
ATPAF1-203ENST00000460928 TRGV10A0A0A0MS01 117 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 IGHV3-72A0A0B4J1Y9 119 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms