RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SPINK13Q1W4C9 94 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 TMEM78Q5T7P6 136 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 C5orf17Q8NAS9 161 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 IGF2BP2-AS1Q96M15 143 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 ARL2-SNX15V9GYD0 113 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 SERTM2A0A1B0GWG4 89 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 PPT1P50897 306 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 SUMO1P63165 101 aaKnown RBP16.34■□□□□ 0.21
C9orf3-209ENST00000460573 ZFAND6Q6FIF0 208 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 OR11H2Q8NH07 326 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 AGPAT4-IT1Q9H0P7 198 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 NBEAL2Q6ZNJ1 2754 aa16.34■□□□□ 0.21
C9orf3-209ENST00000460573 IGKV2-40A0A087WW87 121 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-209ENST00000460573 TRAV1-1A0A0B4J248 108 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 ZNF705EA8MWA4 302 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-209ENST00000460573 M0R2Z0 102 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 IGKV2D-40P01614 121 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-209ENST00000460573 CT45A10P0DMU9 189 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 LEPP41159 167 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 ERCC8Q13216 396 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 STAB2Q8WWQ8 2551 aa16.33■□□□□ 0.2
C9orf3-209ENST00000460573 KMT2CQ8NEZ4 4911 aaKnown RBP16.33■□□□□ 0.2
C9orf3-209ENST00000460573 TRBV7-9A0A0J9YWB2 115 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 FAM74A7A6NL05 159 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 INSP01308 110 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 HBE1P02100 147 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 VGLL1Q99990 258 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 ZNF492Q9P255 531 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 GOLT1BQ9Y3E0 138 aa16.32■□□□□ 0.2
C9orf3-209ENST00000460573 GGTLC3B5MD39 225 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 K7EQM0 130 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 CRXO43186 299 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-209ENST00000460573 ZNF138P52744 262 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 UBE2G2P60604 165 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 ZNF705AQ6ZN79 300 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-209ENST00000460573 NEU1Q99519 415 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 EPDR1Q9UM22 224 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 RPH3ALQ9UNE2 315 aa16.31■□□□□ 0.2
C9orf3-209ENST00000460573 YTHDF2Q9Y5A9 579 aaKnown RBP16.31■□□□□ 0.2
C9orf3-209ENST00000460573 TCRAP04437 139 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 NMBP08949 121 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 MIFP14174 115 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 BLOC1S1P78537 153 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 FAM19A4Q96LR4 140 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 C20orf144Q9BQM9 153 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 TCEAL7Q9BRU2 100 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 LENEPQ9Y5L5 61 aa16.3■□□□□ 0.2
C9orf3-209ENST00000460573 SMIM9A6NGZ8 99 aa16.29■□□□□ 0.2
C9orf3-209ENST00000460573 GOLT1AQ6ZVE7 132 aa16.29■□□□□ 0.2
C9orf3-209ENST00000460573 TMEM256Q8N2U0 113 aa16.29■□□□□ 0.2
C9orf3-209ENST00000460573 MED9Q9NWA0 146 aa16.29■□□□□ 0.2
C9orf3-209ENST00000460573 TRAV12-2A0A075B6T6 113 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 A0A1B0GV50 99 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 LINC00862A6NCI5 91 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 FBLL1A6NHQ2 334 aaKnown RBP16.28■□□□□ 0.2
C9orf3-209ENST00000460573 CRISP2P16562 243 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 GNG5P63218 68 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 C1orf158Q8N1D5 194 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 HIST1H2BAQ96A08 127 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 ATG101Q9BSB4 218 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 X6R8D5 127 aa16.28■□□□□ 0.2
C9orf3-209ENST00000460573 CST9LP1Q5W188 147 aa16.27■□□□□ 0.2
C9orf3-209ENST00000460573 CYB561D1Q8N8Q1 229 aa16.27■□□□□ 0.2
C9orf3-209ENST00000460573 TMEM208Q9BTX3 173 aa16.27■□□□□ 0.2
C9orf3-209ENST00000460573 EDA2RQ9HAV5 297 aa16.27■□□□□ 0.2
C9orf3-209ENST00000460573 KLLNB2CW77 178 aa16.26■□□□□ 0.19
C9orf3-209ENST00000460573 F6UZH7 168 aa16.26■□□□□ 0.19
C9orf3-209ENST00000460573 PAGE4O60829 102 aa16.26■□□□□ 0.19
C9orf3-209ENST00000460573 CCDC28AQ8IWP9 274 aa16.26■□□□□ 0.19
C9orf3-209ENST00000460573 MANBALQ9NQG1 85 aa16.26■□□□□ 0.19
C9orf3-209ENST00000460573 HUWE1Q7Z6Z7 4374 aaKnown RBP16.26■□□□□ 0.19
C9orf3-209ENST00000460573 IGHV3OR16-12A0A075B7B8 117 aa16.25■□□□□ 0.19
C9orf3-209ENST00000460573 GPX1P07203 203 aa16.25■□□□□ 0.19
C9orf3-209ENST00000460573 PMS2P11Q13670 270 aa16.25■□□□□ 0.19
C9orf3-209ENST00000460573 GFI1BQ5VTD9 330 aa16.25■□□□□ 0.19
C9orf3-209ENST00000460573 IL17DQ8TAD2 202 aa16.25■□□□□ 0.19
C9orf3-209ENST00000460573 C11orf68Q9H3H3 251 aaKnown RBP16.25■□□□□ 0.19
C9orf3-209ENST00000460573 CCL20P78556 96 aa16.24■□□□□ 0.19
C9orf3-209ENST00000460573 TMEM75Q8N9X5 138 aa16.24■□□□□ 0.19
C9orf3-209ENST00000460573 Q8NAQ8 132 aa16.24■□□□□ 0.19
C9orf3-209ENST00000460573 Q8TAT8 98 aa16.24■□□□□ 0.19
C9orf3-209ENST00000460573 TXNDC17Q9BRA2 123 aa16.24■□□□□ 0.19
C9orf3-209ENST00000460573 A0A0J9YWU9 116 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 C7orf71A4D174 169 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 H7BYZ3 331 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 PEX7O00628 323 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 KIR3DS1Q14943 382 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 ZFAND2AQ8N6M9 145 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 LINC01587Q99440 93 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 NIPSNAP3BQ9BS92 247 aa16.23■□□□□ 0.19
C9orf3-209ENST00000460573 IGHV4-28A0A0C4DH34 117 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 TMEM189A5PLL7 270 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 J3KRW8 73 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 IFNA1P01562 189 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 RRN3P1Q2M238 152 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 NDFIP1Q9BT67 221 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 GNG13Q9P2W3 67 aa16.22■□□□□ 0.19
C9orf3-209ENST00000460573 TRAV8-1A0A0A6YYK1 113 aa16.21■□□□□ 0.19
C9orf3-209ENST00000460573 RBMY1A1P0DJD3 496 aaKnown RBP16.21■□□□□ 0.19
C9orf3-209ENST00000460573 RBMY1CP0DJD4 496 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms