RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 C2CD4CQ8TF44 421 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 DERL1Q9BUN8 251 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 SMAD5-AS1Q9Y6J3 95 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 UNC79Q9P2D8 2635 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 PDZD2O15018 2839 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 WNK1Q9H4A3 2382 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 TLN2Q9Y4G6 2542 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRAV9-1A0A075B6T8 112 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 IGKV2-40A0A087WW87 121 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF705FA8MVS1 300 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 C9JQL5 133 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 K7EQG2 157 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 M0R3E3 92 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 GCGP01275 180 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 IGKV2D-40P01614 121 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 AMBPP02760 352 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 S100A4P26447 101 aaKnown RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 SRSF2Q01130 221 aaKnown RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 NOTCH2Q04721 2471 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 FHL3Q13643 280 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 RNF212Q495C1 297 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 CD300EQ496F6 205 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 Q6AWC8 147 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 FOXI2Q6ZQN5 318 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 C9orf47Q6ZRZ4 202 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 C18orf65Q6ZTR6 163 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 Q86TA4 180 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 NHLRC2Q8NBF2 726 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR8A1Q8NGG7 326 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 WIPF2Q8TF74 440 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 KCNS1Q96KK3 526 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 SGK494Q96LW2 274 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 PRR25Q96S07 402 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 CITED1Q99966 193 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF747Q9BV97 191 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 C1QTNF4Q9BXJ3 329 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 SAV1Q9H4B6 383 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 TUBA4BQ9H853 241 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 AURKAIP1Q9NWT8 199 aaPredicted RBP4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 NAT8BQ9UHF3 227 aa4.42□□□□□ -1.7
RNU1-88P-201ENST00000459274 ADCYAP1P18509 176 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 DEFB131AP59861 70 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 RAB4BP61018 213 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 IGFL4Q6B9Z1 124 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 FAM231DQ6ZW35 169 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM61Q8N0U2 210 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 DCANP1Q8TF63 244 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 LINC00479Q96M42 142 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM208Q9BTX3 173 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 RPP21Q9H633 154 aaKnown RBP4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 IL36BQ9NZH7 164 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF492Q9P255 531 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 URGCP-MRPS24S4R325 110 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 ITPR2Q14571 2701 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 BAHCC1Q9P281 2608 aa4.41□□□□□ -1.7
RNU1-88P-201ENST00000459274 FBN2P35556 2912 aa4.4□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRAV8-1A0A0A6YYK1 113 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 A0A1B0GW15 77 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 A0A1W2PPQ1 181 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 FAM231BA6NCW3 169 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 PGPEP1LA6NFU8 196 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 C1orf196B1AJZ1 125 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 NPIPB6E9PJ23 425 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 F2Z2F3 143 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 J3KRW8 73 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 RNASE4P34096 147 aaKnown RBP4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 CDKN1BP46527 198 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 ERCC8Q13216 396 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 RIGQ13278 110 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 WDR73Q6P4I2 378 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 TMEM88Q6PEY1 159 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 NUDT10Q8NFP7 164 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 NUDT11Q96G61 164 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 ODF3Q96PU9 254 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 VGLL1Q99990 258 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 AGPAT4-IT1Q9H0P7 198 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 NAGKQ9UJ70 344 aa4.4□□□□□ -1.71
RNU1-88P-201ENST00000459274 F8P00451 2351 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 A0A0J9YX75 114 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGLV1-51P01701 117 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 MT-ND6P03923 174 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 S100A6P06703 90 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 HLA-DMBP28068 263 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms