RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HIST1H1AQ02539 215 aaPredicted RBP1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 DIAPH2-AS1Q14236 149 aa1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 DEFB115Q30KQ5 88 aa1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 FOXI2Q6ZQN5 318 aa1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 SPANXCQ9NY87 97 aa1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.53□□□□□ -2.16
HMGN3P1-201ENST00000453847 MYH1P12882 1939 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 ARHGAP31Q2M1Z3 1444 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 C5orf58C9J3I9 102 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 TRACP01848 142 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 SLC25A4P12235 298 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 HSD17B12Q53GQ0 312 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 OR8J3Q8NGG0 315 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 LZICQ8WZA0 190 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 TNRC6AQ8NDV7 1962 aaKnown RBP1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 KIAA1549LQ6ZVL6 1849 aa1.52□□□□□ -2.17
HMGN3P1-201ENST00000453847 PHRF1Q9P1Y6 1649 aaKnown RBP1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 FREM3P0C091 2139 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 M0R2N4 97 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 UQCRQO14949 82 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 INE1O15225 51 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 SAA1P0DJI8 122 aaPredicted RBP1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 BLCAPP62952 87 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 HAGHLQ6PII5 290 aaPredicted RBP1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 KRTAP4-3Q9BYR4 195 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 CST11Q9H112 138 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 BANF2Q9H503 90 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 ORMDL1Q9P0S3 153 aa1.51□□□□□ -2.17
HMGN3P1-201ENST00000453847 FANCMQ8IYD8 2048 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 IGKV3D-7A0A0C4DH55 119 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 CCL25O15444 150 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 HMGN1P05114 100 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 CD14P08571 375 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 SNRPD3P62318 126 aaKnown RBP1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 QRFPP83859 136 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 GLYATL3Q5SZD4 288 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 GKN2Q86XP6 184 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 FAM107BQ9H098 131 aa1.5□□□□□ -2.17
HMGN3P1-201ENST00000453847 FGD6Q6ZV73 1430 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 LOC107986453A0A1B0GWG9 222 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 A6NN06 94 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 MPC1LP0DKB6 136 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 SARNPP82979 210 aaKnown RBP1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 MPV17LQ2QL34 196 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 TMEM91Q6ZNR0 172 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 OR5AK2Q8NH90 309 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 DNAJC15Q9Y5T4 150 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 CDK5RAP2Q96SN8 1893 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 MUC4Q99102 2169 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 PRG4Q92954 1404 aaPredicted RBP1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 ERBINQ96RT1 1412 aa1.49□□□□□ -2.17
HMGN3P1-201ENST00000453847 CASP8AP2Q9UKL3 1982 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 UNC13CQ8NB66 2214 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 C3orf85A0A1B0GTC6 90 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 F8W1H4 67 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 NUPR1O60356 82 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 COX7CP15954 63 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 ZNF25P17030 456 aaPredicted RBP1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 FAM74A1Q5RGS3 127 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 OR4S1Q8NGB4 309 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 OTOSQ8NHW6 89 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 SMIM3Q9BZL3 60 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 ZFP30Q9Y2G7 519 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 ANK1P16157 1881 aa1.48□□□□□ -2.17
HMGN3P1-201ENST00000453847 NDUFA2O43678 99 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 CD3DP04234 171 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 AKR1D1P51857 326 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 OR10AG1Q8NH19 301 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 AP1S3Q96PC3 154 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 LIMD2Q9BT23 127 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 CALML5Q9NZT1 146 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 COPZ2Q9P299 210 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 E9PCH4 1651 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 OVOS2A0A0J9YW53 1432 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 OVOS2Q6IE36 1432 aa1.47□□□□□ -2.17
HMGN3P1-201ENST00000453847 CACNA1BQ00975 2339 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 TRPM7Q96QT4 1865 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 GEMIN2O14893 280 aaKnown RBP1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 HLA-DRB4P13762 266 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 GLIPR1L1Q6UWM5 242 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 CASC2Q6XLA1 102 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 COMMD3Q9UBI1 195 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 METTL1Q9UBP6 276 aaKnown RBP1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 MPC1Q9Y5U8 109 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 HLA-DRB4X5D2U9 266 aa1.46□□□□□ -2.18
HMGN3P1-201ENST00000453847 CTTNBP2Q8WZ74 1663 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 EML5Q05BV3 1969 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 PTPRDP23468 1912 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGKV3-7A0A075B6H7 116 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 LOC107984156A0A0G2JMH3 177 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 H3BRM9 83 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 DNAL4O96015 105 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 TSPAN19P0C672 248 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms