RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GNRH2O43555 120 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 NDUFB6O95139 128 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 DNAH10OSP0CZ25 163 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 GTF3C1Q12789 2109 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 ESRGQ1W209 222 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 ASB16-AS1Q495Z4 193 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 ARL17AQ8IVW1 177 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 DSCR8Q96T75 97 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 S100A13Q99584 98 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 NPVFQ9HCQ7 196 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 KIF26AQ9ULI4 1882 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 CHD1O14646 1710 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 A6NN06 94 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 CPSF4O95639 269 aaKnown RBP2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 IL4P05112 153 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 COX7CP15954 63 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 DCDP81605 110 aaKnown RBP2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q0VG73 95 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 FAM27BQ5VT28 67 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 C12orf73Q69YU5 71 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 LYZL1Q6UWQ5 148 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 TSKUQ8WUA8 353 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 LINC00052Q96N35 136 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 PLEKHH2Q8IVE3 1493 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 LTBP1Q14766 1721 aa2.87□□□□□ -1.95
HMGB3P21-201ENST00000452483 UACAQ9BZF9 1416 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 RBAKDNA6NC62 111 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 C11orf86A6NJI1 115 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 GNGT2O14610 69 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 SSSCA1O60232 199 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 PROSCO94903 275 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRAPPC2P0DI81 140 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRAPPC2BP0DI82 140 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 PIPP12273 146 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF22P17026 224 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q5W150 140 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 UNQ5815/PRO19632Q6UWF5 114 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q6ZS52 159 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 FP248Q71RG6 208 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q8IYB0 196 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 C10orf82Q8WW14 230 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 SMIM7Q9BQ49 75 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 ARID1AO14497 2285 aa2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P21-201ENST00000452483 HELZP42694 1942 aaKnown RBP2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 PTPRBP23467 1997 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 SPHKAPQ2M3C7 1700 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 MYO10Q9HD67 2058 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 ABCC3O15438 1527 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 K7EP34 96 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 MRPS14O60783 128 aaKnown RBP2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 CYB5AP00167 134 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 MGST1P10620 155 aaKnown RBP2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q6ZQT0 140 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q8N814 137 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q96M85 177 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 SLC50A1Q9BRV3 221 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 DPH3P1Q9H4G8 78 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 FAM215AQ9Y5M1 114 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 MYH1P12882 1939 aa2.85□□□□□ -1.95
HMGB3P21-201ENST00000452483 PIGBOS1A0A0B4J2F0 54 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 UBE2L5PA0A1B0GUS4 154 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGLV1-51P01701 117 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 GYPAP02724 150 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 CRPP02741 224 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 PIRTP0C851 137 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 COL8A2P25067 703 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 ASIPP42127 132 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 UBE2L3P68036 154 aaKnown RBP2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 ALKAL2Q6UX46 152 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 LINC00301Q8NCQ3 95 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 PMCHL2Q9BQD1 86 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 HHLA3Q9XRX5 114 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRPM6Q9BX84 2022 aa2.84□□□□□ -1.95
HMGB3P21-201ENST00000452483 GAPVD1Q14C86 1478 aa2.84□□□□□ -1.96
HMGB3P21-201ENST00000452483 PTPRSQ13332 1948 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 LTBP4Q8N2S1 1624 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 CC2D2AQ9P2K1 1620 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 E7EQL1 145 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 F8W1H4 67 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 PANO1I0J062 215 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 UBL3O95164 117 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 APOC3P02656 99 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 CLPSP04118 112 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 ROMO1P60602 79 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 ZNF816Q0VGE8 651 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 NNATQ16517 81 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 KRTAP24-1Q3LI83 254 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 SPRNQ5BIV9 151 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 C1orf134Q5TEV5 83 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 SBSPONQ8IVN8 264 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 UBALD1Q8TB05 177 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 C14orf132Q9NPU4 83 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 MINOS1-NBL1R4GNA1 71 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms