RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 HAX1O00165 279 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 PROK1P58294 105 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 RAB5BP61020 215 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 CT83Q5H943 113 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 DUX3Q96PT4 197 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 ASCL2Q99929 193 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
USP39-207ENST00000450066 RPP21Q9H633 154 aaKnown RBP10.77□□□□□ -0.69
USP39-207ENST00000450066 PEMTQ9UBM1 199 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 IGKV3-7A0A075B6H7 116 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 CA1P00915 261 aaPredicted RBP10.77□□□□□ -0.69
USP39-207ENST00000450066 CT45A10P0DMU9 189 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 ERCC8Q13216 396 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 OR9G4Q8NGQ1 327 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 Q8TAT8 98 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 DCANP1Q8TF63 244 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 NDFIP1Q9BT67 221 aa10.77□□□□□ -0.69
USP39-207ENST00000450066 FHL3Q13643 280 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 TSKUQ8WUA8 353 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 AGPAT4-IT1Q9H0P7 198 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 PPP1R14DQ9NXH3 145 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 SELENOKQ9Y6D0 94 aa10.76□□□□□ -0.69
USP39-207ENST00000450066 OVOL1O14753 267 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 ID1P41134 155 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 CRIP1P50238 77 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 TMEM78Q5T7P6 136 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 ADAMTSL5Q6ZMM2 481 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 DLX4Q92988 240 aaPredicted RBP10.75□□□□□ -0.69
USP39-207ENST00000450066 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 TRGC2P03986 189 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 ZNF138P52744 262 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 TCL1AP56279 114 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 ZFP82Q8N141 532 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 GPR61Q9BZJ8 451 aa10.75□□□□□ -0.69
USP39-207ENST00000450066 A8MWL6 223 aa10.74□□□□□ -0.69
USP39-207ENST00000450066 CCL24O00175 119 aa10.74□□□□□ -0.69
USP39-207ENST00000450066 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
USP39-207ENST00000450066 FAM162BQ5T6X4 162 aa10.74□□□□□ -0.69
USP39-207ENST00000450066 NIPBLQ6KC79 2804 aaeCLIP10.74□□□□□ -0.695e-6■■■■■ 32.2
USP39-207ENST00000450066 SMUG1Q53HV7 270 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 IZUMO1RA6ND01 250 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 OR2D3Q8NGH3 330 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 LINC00477Q96M19 166 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 NEU1Q99519 415 aa10.73□□□□□ -0.69
USP39-207ENST00000450066 K7EQG2 157 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 PHOX2AO14813 284 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 CSN3P07498 182 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 WFDC3Q8IUB2 231 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 LENEPQ9Y5L5 61 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 F8P00451 2351 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 SH2D1AO60880 128 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
USP39-207ENST00000450066 PAFAH1B2P68402 229 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
USP39-207ENST00000450066 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.69
USP39-207ENST00000450066 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
USP39-207ENST00000450066 ACTL10Q5JWF8 245 aa10.71□□□□□ -0.69
USP39-207ENST00000450066 C2CD3Q4AC94 2353 aa10.71□□□□□ -0.7
USP39-207ENST00000450066 A0A1B0GUS0 222 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 LOC105371267A0A1B0GV96 52 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
USP39-207ENST00000450066 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
USP39-207ENST00000450066 TFPI2P48307 235 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 GTSF1Q8WW33 167 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 FABP5P3A8MUU1 101 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 SPINK4O60575 86 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 FRZBQ92765 325 aa10.7□□□□□ -0.7
USP39-207ENST00000450066 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 F6UB75 175 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 FOXA3P55318 350 aaPredicted RBP10.69□□□□□ -0.7
USP39-207ENST00000450066 DEFB1P60022 68 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
USP39-207ENST00000450066 COX19Q49B96 90 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 RBPMS2Q6ZRY4 209 aaKnown RBP10.69□□□□□ -0.7
USP39-207ENST00000450066 GNB1LQ9BYB4 327 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
USP39-207ENST00000450066 TRAPPC1Q9Y5R8 145 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 TRBV7-9A0A0J9YWB2 115 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BKO60814 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BJP06899 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BOP23527 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BBP33778 126 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms