RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	VWC2	Q2TAL6	325 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	KIR2DL4	Q99706	377 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	RETN	Q9HD89	108 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	IGHV3-16	A0A0C4DH30	117 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	ZNF705F	A8MVS1	300 aa	Predicted RBP	6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	MIF	P14174	115 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	AP1S3	Q96PC3	154 aa		6.45	□□□□□ -1.38
HCG18-238	ENST00000449544	CFAP47	Q6ZTR5	3102 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	TMEM213	A2RRL7	107 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	PEX7	O00628	323 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	S100A2	P29034	98 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	LRTM2	Q8N967	370 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	PYGO2	Q9BRQ0	406 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	ICOS	Q9Y6W8	199 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544		A0A096LNT2	108 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	KIR2DL5B	A0A0G2JN68	375 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	KIR2DL5B	A0A0G2JPC4	375 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544		H0Y8G0	127 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544		H3BVH4	76 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	NDUFB4	O95168	129 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	BRI3	O95415	125 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GNG5	P63218	68 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	FAM162B	Q5T6X4	162 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	FA2H	Q7L5A8	372 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	KIR2DL5A	Q8N109	375 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544		Q8N6K4	173 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	KIR2DL5B	Q8NHK3	375 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	C16orf74	Q96GX8	76 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GSN-AS1	Q9NRJ2	163 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GAGE12J	A6NER3	117 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	PCP4L1	A6NKN8	68 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	IGLV1-40	P01703	118 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	CSN3	P07498	182 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GAGE1	Q13065	139 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GAGE4	Q13068	117 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GAGE5	Q13069	117 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	ERCC8	Q13216	396 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	GAGE13	Q4V321	117 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	PRSS3P2	Q8NHM4	247 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	C8orf49	Q96NF6	230 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	VAX2	Q9UIW0	290 aa		6.44	□□□□□ -1.38
HCG18-238	ENST00000449544	TMEM241	Q24JQ0	296 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	SLC35B3	Q9H1N7	401 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544		I3L2K1	104 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	IGLV1-51	P01701	117 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	COTL1	Q14019	142 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	CCDC140	Q96MF4	163 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	ASH1L	Q9NR48	2969 aa	Known RBP	6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	TACC2	O95359	2948 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	IFITM2	Q01629	132 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	PDE6H	Q13956	83 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	GCSAML	Q5JQS6	135 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	FAM222A	Q5U5X8	452 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	LAMA1	P25391	3075 aa		6.43	□□□□□ -1.38
HCG18-238	ENST00000449544	FSHB	P01225	129 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	IGKV1-17	P01599	117 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	CXCL3	P19876	107 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	NBEA	Q8NFP9	2946 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	IGKV2D-24	A0A075B6R9	120 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	IGKV1-39	P01597	117 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	IGKV1D-39	P04432	117 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	PSMG3	Q9BT73	122 aa	Predicted RBP	6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	PROP1	O75360	226 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544		P0DMU3	169 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	FAM231A	P0DMU4	169 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	FAM231C	P0DMU5	169 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	C16orf54	Q6UWD8	224 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	SAMD10	Q9BYL1	202 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	MRPL16	Q9NX20	251 aa	Known RBP	6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	EPDR1	Q9UM22	224 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	IGKV1OR2-108	A0A075B7D4	117 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	PFN1	P07737	140 aa	Known RBP	6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	TMEM14EP	Q6UXP3	125 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	OR11H7	Q8NGC8	314 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	OR10G8	Q8NGN5	311 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544	B9D2	Q9BPU9	175 aa		6.42	□□□□□ -1.38
HCG18-238	ENST00000449544		A0A1W2PPQ1	181 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	SMIM9	A6NGZ8	99 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	RHOD	O00212	210 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	TAS2R60	P59551	318 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	NANOS2	P60321	138 aa	Known RBP	6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	SSBP2	P81877	361 aa	Predicted RBP	6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	FABP9	Q0Z7S8	132 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	TTC32	Q5I0X7	151 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544		Q6ZWC4	215 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	SPX	Q9BT56	116 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	BUB3	O43684	328 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	CXCL2	P19875	107 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	MGST2	Q99735	147 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544		U3KQE9	123 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544		E7EUB6	86 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	PRSS2	P07478	247 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	G0S2	P27469	103 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	CKS2	P33552	79 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	BAGE3	Q86Y29	109 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	LYPD1	Q8N2G4	141 aa		6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.41	□□□□□ -1.38
HCG18-238	ENST00000449544	ZFP30	Q9Y2G7	519 aa		6.41	□□□□□ -1.38

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