RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GCN1Q92616 2671 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 MMP23AO75900 390 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 FAM89BQ8N5H3 189 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 MYOZ3Q8TDC0 251 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 SEC11CQ9BY50 192 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 CPAMD8Q8IZJ3 1885 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 TRBV6-6A0A0A6YYG2 114 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGSF23A1L1A6 192 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 RBMY1A1P0DJD3 496 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 COX19Q49B96 90 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 LRTM2Q8N967 370 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 UBE2D4Q9Y2X8 147 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 MUC22E2RYF6 1773 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 BPTFQ12830 3046 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 RND3P61587 244 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 KLK15Q9H2R5 256 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 TRAV25A0A0B4J276 109 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 DYNLT3P51808 116 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 SS18Q15532 418 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 LINC00305Q7Z4B0 112 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 C11orf53Q8IXP5 236 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 C5orf56Q8N8D9 126 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR10D4PQ8NGN7 298 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 VWC2LB2RUY7 222 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 CAMPP49913 170 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 CD300CQ08708 224 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 ICAM4Q14773 271 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 MIC13Q5XKP0 118 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF503Q96F45 646 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 PRR13Q9NZ81 148 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 F6UB75 175 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 BUB3O43684 328 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF833PQ6ZTB9 187 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 NOTCH1P46531 2555 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 GNG4P50150 75 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 RPL32P62910 135 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 FAM90A2PQ658T7 463 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGFBPL1Q8WX77 278 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 KIR2DL4Q99706 377 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 TRAV26-2A0A0B4J265 109 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 RSPO1Q2MKA7 263 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 HSPB9Q9BQS6 159 aa4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 MRPL32Q9BYC8 188 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGKV1D-13A0A0B4J2D9 117 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 P01737 135 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGKV1-13P0DP09 117 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF124Q15973 351 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 LINC00299Q6ZSB3 139 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 PARP12Q9H0J9 701 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 CXorf1O96002 111 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 SPATA31B1PQ5VZV4 182 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 LY96Q9Y6Y9 160 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 PGPEP1LA6NFU8 196 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 NANOS2P60321 138 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A1B0GV90 55 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGLV2-8P01709 118 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 NBEAP1P0C6P0 100 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A1B0GWB2 263 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 C5orf24Q7Z6I8 188 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 LY6G5BQ8NDX9 201 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 GGACTQ9BVM4 153 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 GAGE2EQ4V326 116 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 C9orf153Q5TBE3 101 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 MGST2Q99735 147 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 GAGE2DQ9UEU5 116 aa4.41□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF727A8MUV8 499 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 CBLN1P23435 193 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 ATP5L2Q7Z4Y8 100 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 RHODO00212 210 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 SLC25A34Q6PIV7 304 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 Q8N9W7 124 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR5A1Q8NGJ0 315 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 SMIM8Q96KF7 97 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 LINC00479Q96M42 142 aa4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV7-81A0A0B4J1V7 117 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV8-2A0A0B4J237 113 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGHV7-4-1A0A0J9YVY3 117 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 RBMY1CP0DJD4 496 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF680Q8NEM1 530 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 ATP6V0BQ99437 205 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms