RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 C16orf47Q6ZP98 133 aaPredicted RBP8.39□□□□□ -1.07
LINC00342-202ENST00000448494 NCOR1O75376 2440 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 TET1Q8NFU7 2136 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 ATOX1O00244 68 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 SS18L1O75177 396 aaPredicted RBP8.39□□□□□ -1.07
LINC00342-202ENST00000448494 RPL35AP18077 110 aaKnown RBP8.39□□□□□ -1.07
LINC00342-202ENST00000448494 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 BDP1A6H8Y1 2624 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 hADV29S1A0JD25 119 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 PROP1O75360 226 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 TMEM86BQ8N661 226 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 PROK2Q9HC23 129 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 METRNQ9UJH8 293 aa8.38□□□□□ -1.07
LINC00342-202ENST00000448494 ARHGEF17Q96PE2 2063 aaPredicted RBP8.38□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-15A0A0B4J1V0 119 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 CXCL10P02778 98 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 COX6B1P14854 86 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 LILRA6Q6PI73 481 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 PLXDC1Q8IUK5 500 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 TMEM75Q8N9X5 138 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 UCN2Q96RP3 112 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 RNASE2P10153 161 aaKnown RBP8.37□□□□□ -1.07
LINC00342-202ENST00000448494 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 RPS19BP1Q86WX3 136 aaKnown RBP8.37□□□□□ -1.07
LINC00342-202ENST00000448494 C8orf31Q8N9H6 132 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
LINC00342-202ENST00000448494 ZFAND5O76080 213 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 COX6A1P12074 109 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 PRDX2P32119 198 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
LINC00342-202ENST00000448494 HES3Q5TGS1 186 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 METTL26Q96S19 204 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 CHD9Q3L8U1 2897 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 A0A0J9YY99 117 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 GP9P14770 177 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 MLANAQ16655 118 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
LINC00342-202ENST00000448494 ZNF71Q9NQZ8 489 aaPredicted RBP8.36□□□□□ -1.07
LINC00342-202ENST00000448494 A0A0B4J2C4 111 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 SPINT2O43291 252 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-13P01766 116 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 HERVK_113P61574 105 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 NFAM1Q8NET5 270 aaPredicted RBP8.35□□□□□ -1.07
LINC00342-202ENST00000448494 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 PSPNO60542 156 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 PFN2P35080 140 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 GOLT1AQ6ZVE7 132 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 RNF125Q96EQ8 232 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 Q9UFV3 132 aa8.35□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 LY6LH3BQJ8 138 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 J3QQQ9 107 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 ZNF883P0CG24 379 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 LAGE3Q14657 143 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 C9orf85Q96MD7 179 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 A0A1W2PR77 199 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 DEFB108AA8MXU0 73 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 PLAUP00749 431 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 CRIP1P50238 77 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 AAED1Q7RTV5 226 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 CACNA1DQ01668 2161 aa8.34□□□□□ -1.07
LINC00342-202ENST00000448494 LRP4O75096 1905 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 ABCA7Q8IZY2 2146 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 IGKV1D-37A0A075B6S9 117 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 ZNF22P17026 224 aaPredicted RBP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 SUB1P53999 127 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 H7C423 109 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 UPK2O00526 184 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 TIMM8AO60220 97 aaPredicted RBP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 SSR4P51571 173 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 TCF15Q12870 199 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 MRPL14Q6P1L8 145 aaKnown RBP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
LINC00342-202ENST00000448494 ZCCHC24Q8N2G6 241 aaKnown RBP8.33□□□□□ -1.08
LINC00342-202ENST00000448494 REV3LO60673 3130 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 C17orf100A8MU93 164 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 H0Y8X5 98 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 ENSAO43768 121 aaKnown RBP8.32□□□□□ -1.08
LINC00342-202ENST00000448494 KLRB1Q12918 225 aa8.32□□□□□ -1.08
LINC00342-202ENST00000448494 PRR25Q96S07 402 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms