RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PKD1L2Q7Z442 2459 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 K7EN84 100 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 ZNF32P17041 273 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 RHOHQ15669 191 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 Q6ZRM9 215 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 TRPT1Q86TN4 253 aaKnown RBP2.34□□□□□ -2.03
CHD9-203ENST00000447540 KLHDC9Q8NEP7 349 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 NAA38Q9BRA0 125 aaKnown RBP2.34□□□□□ -2.03
CHD9-203ENST00000447540 ADAMTS20P59510 1910 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 NAV2Q8IVL1 2488 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 SPRY1O43609 319 aaPredicted RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 CR1LQ2VPA4 569 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 ZNF501Q96CX3 271 aaPredicted RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 PRSS38A1L453 326 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 TIMM17BO60830 172 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 LINC00694P0DN24 101 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 DUTP33316 252 aaKnown RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 TRIP6Q15654 476 aaKnown RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 DEFB121Q5J5C9 76 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 MIR17HGQ75NE6 70 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 IGF2BP2-AS1Q96M15 143 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 ZNF581Q9P0T4 197 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 A0A1W2PQU0 124 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 VCYO14598 125 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 IGFBP6P24592 240 aaPredicted RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 Q86TA4 180 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 PHLDA1Q8WV24 401 aaPredicted RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 RITA1Q96K30 269 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 SMIM14Q96QK8 99 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 PTPRSQ13332 1948 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 PMS2P5A8MQ11 134 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 K7EM74 188 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 IGKV3-11P04433 115 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 FOXQ1Q9C009 403 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 LINC00527Q9UJ94 153 aa2.34□□□□□ -2.04
CHD9-203ENST00000447540 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.04
CHD9-203ENST00000447540 SHISA8B8ZZ34 492 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 UPK2O00526 184 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 ZNF114Q8NC26 417 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 TIMM17AQ99595 171 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 RNF5Q99942 180 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 CNFNQ9BYD5 112 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 PCNTO95613 3336 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1-8A0A0C4DH67 115 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 LTAP01374 205 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 P0C879 139 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 IL17RELQ6ZVW7 336 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 TRAV13-2A0A0B4J235 113 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1D-13A0A0B4J2D9 117 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 KLK10O43240 276 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1-13P0DP09 117 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 Q9H3A6 140 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 CCDC168Q8NDH2 2452 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 J3QQQ9 107 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 SPRNQ5BIV9 151 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 A0A0J9YX75 114 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 CT62P0C5K7 136 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 PRNTQ86SH4 94 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 HES7Q9BYE0 225 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 KMT2BQ9UMN6 2715 aaPredicted RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 TMSB15BA0A087X1C1 80 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 SRRM4A7MD48 611 aaKnown RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 NXPH3O95157 252 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 Q6JHZ5 121 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 A0A1W2PR77 199 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 SUMO2P61956 95 aaKnown RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 ZCCHC24Q8N2G6 241 aaKnown RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 SMIM2Q9BVW6 85 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 TMEM14BQ9NUH8 114 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 LRP4O75096 1905 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 NDUFB1O75438 58 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 CISD3P0C7P0 127 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 FAM53AQ6NSI3 398 aaPredicted RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 LINC00305Q7Z4B0 112 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 TSACCQ96A04 125 aaPredicted RBP2.33□□□□□ -2.04
CHD9-203ENST00000447540 STPG1Q5TH74 334 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 ZNF329Q86UD4 541 aa2.33□□□□□ -2.04
CHD9-203ENST00000447540 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 ZNF672Q499Z4 452 aaPredicted RBP2.32□□□□□ -2.04
CHD9-203ENST00000447540 AJUBAQ96IF1 538 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 GJD4Q96KN9 370 aaPredicted RBP2.32□□□□□ -2.04
CHD9-203ENST00000447540 KIAA1549LQ6ZVL6 1849 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 TRAV4A0A0B4J268 109 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 CXCL17Q6UXB2 119 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 UTRNP46939 3433 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 NXPH4O95158 308 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 FGF22Q9HCT0 170 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 THAP8Q8NA92 274 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 IGHV3-33P01772 117 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 NHLRC4P0CG21 123 aaPredicted RBP2.32□□□□□ -2.04
CHD9-203ENST00000447540 CYB5D2Q8WUJ1 264 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms