RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 KRTAP4-16G5E9R7 235 aaPredicted RBP1.9□□□□□ -2.11
PMS1-215ENST00000447232 TSPAN13O95857 204 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 IGKV1-5P01602 117 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 TCRBP04435 133 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 LINC00694P0DN24 101 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 Q0VG73 95 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 MAJINQ3KP22 176 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 AARDQ4LEZ3 155 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 ENHOQ6UWT2 76 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 Q6ZQT7 251 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
PMS1-215ENST00000447232 SLC25A29Q8N8R3 303 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 BEST4Q8NFU0 473 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 EI24O14681 340 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 MPDU1O75352 247 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 HLA-DQA1P01909 254 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 PRSS2P07478 247 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 MYL12AP19105 171 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 RPL13AP40429 203 aaKnown RBP1.9□□□□□ -2.11
PMS1-215ENST00000447232 TSPAN5P62079 268 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 SPATA24Q86W54 205 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 CENPNQ96H22 339 aaPredicted RBP1.9□□□□□ -2.11
PMS1-215ENST00000447232 FAM19A4Q96LR4 140 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 CHCHD7Q9BUK0 85 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 SH3BGRL3Q9H299 93 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 ENY2Q9NPA8 101 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 URGCP-MRPS24S4R325 110 aa1.9□□□□□ -2.11
PMS1-215ENST00000447232 FLGP20930 4061 aaPredicted RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 IGHV3-16A0A0C4DH30 117 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 TRBV6-4A0A1B0GX49 114 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 METTL21EPA6NDL7 271 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 ZFP92A6NM28 416 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 GPR31O00270 319 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 WBP4O75554 376 aaKnown RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 FCGR1AP12314 374 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 RANBP1P43487 201 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 TAS2R20P59543 309 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 POLR2GP62487 172 aaKnown RBP eCLIP1.89□□□□□ -2.11
PMS1-215ENST00000447232 COX6A2Q02221 97 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 BTN1A1Q13410 526 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 ELOBQ15370 118 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 RHOHQ15669 191 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 NMSQ5H8A3 153 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 HOGA1Q86XE5 327 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 FER1L6-AS1Q8NA97 138 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 BPIFCQ8NFQ6 507 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 OR4C5Q8NGB2 326 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 OR52I2Q8NH67 350 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 MARCH1Q8TCQ1 289 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 ANP32BQ92688 251 aaKnown RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 TRGV9Q99603 122 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 PDCD10Q9BUL8 212 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 ZNF331Q9NQX6 463 aaPredicted RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 RRP15Q9Y3B9 282 aaKnown RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 H0Y9J4 135 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 H3BRN7 92 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 MRPS12O15235 138 aaKnown RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 CFDP00746 253 aaPredicted RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 FABP1P07148 127 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 RPL7P18124 248 aaKnown RBP1.89□□□□□ -2.11
PMS1-215ENST00000447232 CXCL2P19875 107 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 ZNF138P52744 262 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 SPCS3P61009 180 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 HERV-K104P61576 105 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 SRPXP78539 464 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 GUK1Q16774 197 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 DHRS11Q6UWP2 260 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 DIRC1Q969H9 104 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 PRADC1Q9BSG0 188 aa1.89□□□□□ -2.11
PMS1-215ENST00000447232 A0A087WWC5 75 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 IGKV2-24A0A0C4DH68 120 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 IRGMA1A4Y4 181 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 EFCAB10A6NFE3 127 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 NDUFS6O75380 124 aaKnown RBP1.88□□□□□ -2.11
PMS1-215ENST00000447232 HSMCR30P0CW71 290 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 SMIM18P0DKX4 95 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 GNG2P59768 71 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 OPCMLQ14982 345 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 TMEM91Q6ZNR0 172 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 TBC1D26Q86UD7 250 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 FAM219AQ8IW50 185 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 ARL6IP6Q8N6S5 226 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 OR5AP2Q8NGF4 316 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 TMEM80Q96HE8 168 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 ARPC5LQ9BPX5 153 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 SPXQ9BT56 116 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 FXYD6Q9H0Q3 95 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 C8orf4Q9NR00 106 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 V9GY05 133 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 IGLV7-46A0A075B6I9 117 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 A0A0G2JRQ6 117 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 hDV102S1A0JD36 115 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 CRYM-AS1A6NIL9 109 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 IFNA7P01567 189 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms