RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 UQCRFS1P47985 274 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 LINC01559Q495D7 138 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 GTF2H5Q6ZYL4 71 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 LY6HO94772 140 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 ORM1P02763 201 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 HLA-DMBP28068 263 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 PRSS57Q6UWY2 283 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 VMO1Q7Z5L0 202 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 DYNAPQ8N1N2 210 aa14.8□□□□□ -0.04
SDCBP-204ENST00000447182 NXT2Q9NPJ8 142 aaKnown RBP14.8□□□□□ -0.04
SDCBP-204ENST00000447182 ANKHD1Q8IWZ3 2542 aaKnown RBP14.79□□□□□ -0.04
SDCBP-204ENST00000447182 K7ERU9 68 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 GRNP28799 593 aaKnown RBP14.79□□□□□ -0.04
SDCBP-204ENST00000447182 RIF1Q5UIP0 2472 aaKnown RBP14.79□□□□□ -0.04
SDCBP-204ENST00000447182 IGFL4Q6B9Z1 124 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 AP1S3Q96PC3 154 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 ZMAT4Q9H898 229 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 MSRB1Q9NZV6 116 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 DKK2Q9UBU2 259 aa14.79□□□□□ -0.04
SDCBP-204ENST00000447182 RBAKDNA6NC62 111 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 FCER1GP30273 86 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 RAB9AP51151 201 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 TCF15Q12870 199 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 MINOS1Q5TGZ0 78 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 MINOS1-NBL1R4GNA1 71 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 IGHV7-81A0A0B4J1V7 117 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 FAM90A27PA6NNH2 459 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 COTL1Q14019 142 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 PCP2Q8IVA1 136 aa14.78□□□□□ -0.04
SDCBP-204ENST00000447182 KLK9Q2XQG4 91 aa14.77□□□□□ -0.04
SDCBP-204ENST00000447182 JMJD8Q96S16 334 aa14.77□□□□□ -0.04
SDCBP-204ENST00000447182 VPS25Q9BRG1 176 aa14.77□□□□□ -0.04
SDCBP-204ENST00000447182 KLK9Q9UKQ9 250 aa14.77□□□□□ -0.04
SDCBP-204ENST00000447182 TNFRSF6BO95407 300 aa14.77□□□□□ -0.05
SDCBP-204ENST00000447182 NMUP48645 174 aa14.77□□□□□ -0.05
SDCBP-204ENST00000447182 TMEM11P17152 192 aa14.76□□□□□ -0.05
SDCBP-204ENST00000447182 ODF1Q14990 250 aa14.76□□□□□ -0.05
SDCBP-204ENST00000447182 ABCA4P78363 2273 aa14.76□□□□□ -0.05
SDCBP-204ENST00000447182 A0A0G2JLM5 398 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 H3BUT2 72 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 K7EP34 96 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 BUB3O43684 328 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 LEPP41159 167 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 ZNF502Q8TBZ5 544 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 ZFAND3Q9H8U3 227 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 GAS8-AS1O95177 125 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 ERCC8Q13216 396 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 C11orf71Q6IPW1 123 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 Q8N9W7 124 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 FAM110DQ8TAY7 271 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-204ENST00000447182 HIGD1BQ9P298 99 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 HHLA3Q9XRX5 114 aa14.75□□□□□ -0.05
SDCBP-204ENST00000447182 PRAC2D3DTV9 90 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 K7ENP7 123 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 TCTAP57738 103 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 SMIM15Q7Z3B0 74 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 WFDC3Q8IUB2 231 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 C18orf15Q96N68 181 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 SLC50A1Q9BRV3 221 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 MSRB2Q9Y3D2 182 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.74□□□□□ -0.05
SDCBP-204ENST00000447182 OR2K2Q8NGT1 345 aa14.73□□□□□ -0.05
SDCBP-204ENST00000447182 SMPXQ9UHP9 88 aa14.73□□□□□ -0.05
SDCBP-204ENST00000447182 C15orf32Q32M92 178 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 IL17RELQ6ZVW7 336 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 DTX2Q86UW9 622 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 Q8N8P6 123 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 DCHS2Q6V1P9 2916 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 IGLV2-18A0A075B6J9 118 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 IGHV3OR16-8A0A075B7F1 116 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 EVI2AP22794 236 aa14.72□□□□□ -0.05
SDCBP-204ENST00000447182 TLN1Q9Y490 2541 aaKnown RBP14.71□□□□□ -0.05
SDCBP-204ENST00000447182 IGKV3D-20A0A0C4DH25 116 aa14.71□□□□□ -0.05
SDCBP-204ENST00000447182 IGHV3-35A0A0C4DH35 117 aa14.71□□□□□ -0.05
SDCBP-204ENST00000447182 PRSS47A8MTI9 375 aa14.71□□□□□ -0.05
SDCBP-204ENST00000447182 A0A1W2PPM0 123 aa14.71□□□□□ -0.06
SDCBP-204ENST00000447182 ATP5LO75964 103 aa14.71□□□□□ -0.06
SDCBP-204ENST00000447182 GOSR1O95249 250 aa14.71□□□□□ -0.06
SDCBP-204ENST00000447182 IGKCP01834 107 aa14.71□□□□□ -0.06
SDCBP-204ENST00000447182 RNF182Q8N6D2 247 aa14.71□□□□□ -0.06
SDCBP-204ENST00000447182 ZFHX2Q9C0A1 2572 aaPredicted RBP14.7□□□□□ -0.06
SDCBP-204ENST00000447182 IGKV2D-26A0A0A0MRZ7 120 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 CLPSL1A2RUU4 121 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 CLEC3BP05452 202 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 PRSS1P07477 247 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 HLA-DRB4P13762 266 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 OR5A1Q8NGJ0 315 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 TMEM158Q8WZ71 300 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 MRPL53Q96EL3 112 aaKnown RBP14.7□□□□□ -0.06
SDCBP-204ENST00000447182 HLA-DRB4X5D2U9 266 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 LRBAP50851 2863 aa14.7□□□□□ -0.06
SDCBP-204ENST00000447182 AGPAT4-IT1Q9H0P7 198 aa14.69□□□□□ -0.06
SDCBP-204ENST00000447182 GATA1P15976 413 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-204ENST00000447182 SIRPDQ9H106 197 aa14.69□□□□□ -0.06
SDCBP-204ENST00000447182 C11orf21Q9P2W6 132 aa14.69□□□□□ -0.06
SDCBP-204ENST00000447182 WNK2Q9Y3S1 2297 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 CCL21O00585 134 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 DPM2O94777 84 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 ZFP36P26651 326 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms