RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 LRRK2Q5S007 2527 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 PRAC2D3DTV9 90 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 TRGV3P03979 118 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 ZNF705AQ6ZN79 300 aaPredicted RBP10.87□□□□□ -0.67
NCLP1-201ENST00000445357 TPPP3Q9BW30 176 aa10.87□□□□□ -0.67
NCLP1-201ENST00000445357 ASH1LQ9NR48 2969 aaKnown RBP10.87□□□□□ -0.67
NCLP1-201ENST00000445357 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 M0QZK8 103 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
NCLP1-201ENST00000445357 PPIFP30405 207 aaKnown RBP10.86□□□□□ -0.67
NCLP1-201ENST00000445357 DSCR9P59020 149 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 LINC00469Q8N7U9 141 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 TMEM70Q9BUB7 260 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 U3KQK5 164 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 USP9XQ93008 2570 aaPredicted RBP10.86□□□□□ -0.67
NCLP1-201ENST00000445357 SRSF1Q07955 248 aaKnown RBP eCLIP10.86□□□□□ -0.67
NCLP1-201ENST00000445357 ZNF575Q86XF7 245 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 RNF182Q8N6D2 247 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 LINC00527Q9UJ94 153 aa10.86□□□□□ -0.67
NCLP1-201ENST00000445357 UTP20O75691 2785 aaKnown RBP10.86□□□□□ -0.67
NCLP1-201ENST00000445357 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 H3BUX3 64 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 LEPROTL1O95214 131 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 ARL3P36405 182 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 GLMPQ8WWB7 406 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 B4DSR2 109 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 IGLC3P0DOY3 106 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 ERCC8Q13216 396 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 LY6EQ16553 131 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 KLHDC1Q8N7A1 406 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 CNFNQ9BYD5 112 aa10.85□□□□□ -0.67
NCLP1-201ENST00000445357 CSMD1Q96PZ7 3565 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.67
NCLP1-201ENST00000445357 IGHV3OR16-13A0A075B7E8 117 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 TRAV9-2A0A087WT02 112 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 IGHV3-74A0A0B4J1X5 117 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 C20orf202A1L168 122 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 NDUFA4O00483 81 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
NCLP1-201ENST00000445357 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 UQCR10Q9UDW1 63 aa10.84□□□□□ -0.67
NCLP1-201ENST00000445357 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 SYS1-DBNDD2H3BUS1 97 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 GATA3P23771 443 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 C9orf47Q6ZRZ4 202 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 SLC25A16P16260 332 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 ZNF138P52744 262 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
NCLP1-201ENST00000445357 HIST1H1AQ02539 215 aaPredicted RBP10.83□□□□□ -0.68
NCLP1-201ENST00000445357 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 IL17RELQ6ZVW7 336 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 AP5S1Q9NUS5 200 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 ZNF580Q9UK33 172 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
NCLP1-201ENST00000445357 ORM1P02763 201 aa10.82□□□□□ -0.68
NCLP1-201ENST00000445357 CSN3P07498 182 aa10.82□□□□□ -0.68
NCLP1-201ENST00000445357 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
NCLP1-201ENST00000445357 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
NCLP1-201ENST00000445357 ATOH7Q8N100 152 aa10.82□□□□□ -0.68
NCLP1-201ENST00000445357 D6R8Y8 96 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 AVPP01185 164 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
NCLP1-201ENST00000445357 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 PET117Q6UWS5 81 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 ORMDL3Q8N138 153 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 TMEM191AQ9H0A3 160 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 HSPB8Q9UJY1 196 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 PTPN13Q12923 2485 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 IGLV1-40P01703 118 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
NCLP1-201ENST00000445357 USP9YO00507 2555 aaPredicted RBP10.8□□□□□ -0.68
NCLP1-201ENST00000445357 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 BLCAPP62952 87 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 CFHR3Q02985 330 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 TWIST1Q15672 202 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 MAP1LC3CQ9BXW4 147 aa10.8□□□□□ -0.68
NCLP1-201ENST00000445357 SSTP61278 116 aa10.79□□□□□ -0.68
NCLP1-201ENST00000445357 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
NCLP1-201ENST00000445357 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
NCLP1-201ENST00000445357 A0A096LNT2 108 aa10.79□□□□□ -0.68
NCLP1-201ENST00000445357 IGKV3D-20A0A0C4DH25 116 aa10.79□□□□□ -0.68
NCLP1-201ENST00000445357 MUC21A0A0G2JKD1 596 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 1230.1 ms