RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 OR10J4P0C629 311 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
TREX1-202ENST00000444177 CD300CQ08708 224 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 AKR1C8PQ5T2L2 129 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
TREX1-202ENST00000444177 ACTR3CQ9C0K3 210 aaPredicted RBP10.01□□□□□ -0.81
TREX1-202ENST00000444177 AAMDCQ9H7C9 122 aa10.01□□□□□ -0.81
TREX1-202ENST00000444177 YTHDF2Q9Y5A9 579 aaKnown RBP10.01□□□□□ -0.81
TREX1-202ENST00000444177 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
TREX1-202ENST00000444177 UMAD1C9J7I0 102 aa10□□□□□ -0.81
TREX1-202ENST00000444177 J3KRW8 73 aa10□□□□□ -0.81
TREX1-202ENST00000444177 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
TREX1-202ENST00000444177 STAG3L2P0CL84 134 aa10□□□□□ -0.81
TREX1-202ENST00000444177 STAG3L3P0CL85 134 aa10□□□□□ -0.81
TREX1-202ENST00000444177 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
TREX1-202ENST00000444177 FXYD5Q96DB9 178 aa10□□□□□ -0.81
TREX1-202ENST00000444177 ZNF503Q96F45 646 aa10□□□□□ -0.81
TREX1-202ENST00000444177 LINC01587Q99440 93 aa10□□□□□ -0.81
TREX1-202ENST00000444177 DKK2Q9UBU2 259 aa10□□□□□ -0.81
TREX1-202ENST00000444177 PRELID1Q9Y255 219 aa10□□□□□ -0.81
TREX1-202ENST00000444177 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 PRM2P04554 102 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 HTN1P15515 57 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 TSPOP30536 169 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 LEPP41159 167 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 UBE2L3P68036 154 aaKnown RBP9.99□□□□□ -0.81
TREX1-202ENST00000444177 ICAM4Q14773 271 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
TREX1-202ENST00000444177 SLC51BQ86UW2 128 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 TMEM256Q8N2U0 113 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 C9orf62Q8N4C0 152 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 RAB24Q969Q5 203 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
TREX1-202ENST00000444177 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 CTXND1A0A1B0GTU2 59 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 EIF3GO75821 320 aaKnown RBP eCLIP9.98□□□□□ -0.81
TREX1-202ENST00000444177 CXorf1O96002 111 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 TAS2R60P59551 318 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 ERCC8Q13216 396 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 GFI1BQ5VTD9 330 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 DPPA3Q6W0C5 159 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 PHYHIPLQ96FC7 376 aa9.98□□□□□ -0.81
TREX1-202ENST00000444177 CT45A10P0DMU9 189 aa9.97□□□□□ -0.81
TREX1-202ENST00000444177 HTN3P15516 51 aa9.97□□□□□ -0.81
TREX1-202ENST00000444177 AZU1P20160 251 aa9.97□□□□□ -0.81
TREX1-202ENST00000444177 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
TREX1-202ENST00000444177 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
TREX1-202ENST00000444177 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
TREX1-202ENST00000444177 H7BYZ3 331 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
TREX1-202ENST00000444177 ARL14EPLP0DKL9 152 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 RAB5CP51148 216 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 DAD1P61803 113 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 NDUFAF3Q9BU61 184 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
TREX1-202ENST00000444177 TRAV12-3A0A0B4J271 114 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 GCHFRP30047 84 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 RANP62826 216 aaKnown RBP9.95□□□□□ -0.82
TREX1-202ENST00000444177 ZNF726P1Q15940 193 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 FAM74A1Q5RGS3 127 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 Q9H3A6 140 aa9.95□□□□□ -0.82
TREX1-202ENST00000444177 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 LYRM9A8MSI8 78 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 CSN1S1P47710 185 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 BTN1A1Q13410 526 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 SSX7Q7RTT5 188 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 CCDC28AQ8IWP9 274 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
TREX1-202ENST00000444177 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 LINC00477Q96M19 166 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 OTORQ9NRC9 128 aa9.94□□□□□ -0.82
TREX1-202ENST00000444177 C7orf71A4D174 169 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 HMGB3O15347 200 aaKnown RBP9.93□□□□□ -0.82
TREX1-202ENST00000444177 SLC25A5P05141 298 aaKnown RBP9.93□□□□□ -0.82
TREX1-202ENST00000444177 P0DMU3 169 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 RNASE8Q8TDE3 154 aaKnown RBP9.93□□□□□ -0.82
TREX1-202ENST00000444177 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 MBD3L1Q8WWY6 194 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 VGLL1Q99990 258 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 AGPAT4-IT1Q9H0P7 198 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
TREX1-202ENST00000444177 HERC2O95714 4834 aa9.92□□□□□ -0.82
TREX1-202ENST00000444177 RBAKDNA6NC62 111 aa9.92□□□□□ -0.82
TREX1-202ENST00000444177 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
TREX1-202ENST00000444177 SULT1A2P50226 295 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms