RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZNF492Q9P255 531 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 NAT8BQ9UHF3 227 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 RPH3ALQ9UNE2 315 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 USP34Q70CQ2 3546 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 ARID1AO14497 2285 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRR14LQ5THK1 2151 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 EYSQ5T1H1 3165 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TANC2Q9HCD6 1990 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TRBV19A0A075B6N1 114 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 GRIFINA4D1Z8 144 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TSTD3H0UI37 97 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 H3BRN7 92 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 C19orf84I3L1E1 186 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 NUPR1O60356 82 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 SPINK4O60575 86 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 LTAP01374 205 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 APCSP02743 223 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 IL4P05112 153 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 GZMBP10144 247 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 ESDP10768 282 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 S100A7P31151 101 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 UQCRFS1P47985 274 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TPPP2P59282 170 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 SLC35B1P78383 322 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 USF2Q15853 346 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 IQCJQ1A5X6 159 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR10J3Q5JRS4 329 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 FAM120AOSQ5T036 256 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 ADAMTSL4-AS1Q5T5F5 129 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 LEMD1Q68G75 181 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 MRPL54Q6P161 138 aaKnown RBP2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF600Q6ZNG1 722 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 LRRC75A-AS1Q8N1F1 130 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 LYPD1Q8N2G4 141 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM256Q8N2U0 113 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 NUP35Q8NFH5 326 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR4F17Q8NGA8 305 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 VN1R17PQ8TDU5 208 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TSKUQ8WUA8 353 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 NRN1Q9NPD7 142 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF586Q9NXT0 402 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 C21orf62Q9NYP8 219 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 TP53TG3Q9ULZ0 132 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 LAMA1P25391 3075 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRUNE2Q8WUY3 3088 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 WDR87Q6ZQQ6 2873 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 CACNA1HO95180 2353 aa2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 EP300Q09472 2414 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGHV7-81A0A0B4J1V7 117 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1B0GUS0 222 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 C19orf71A6NCJ1 209 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 FAM231BA6NCW3 169 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF705FA8MVS1 300 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 A8MWL6 223 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 NPFFO15130 113 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 MRPS12O15235 138 aaKnown RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF253O75346 499 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 CRLF1O75462 422 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 SERF1AO75920 110 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR2J3O76001 311 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 CA1P00915 261 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 P01737 135 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 HLA-DRB1P01911 266 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 CTSGP08311 255 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF705DP0CH99 300 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF705BP0CI00 300 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGLC2P0DOY2 106 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 RPL7P18124 248 aaKnown RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 SRIP30626 198 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ID1P41134 155 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 CSN1S1P47710 185 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 KRTAP10-3P60369 221 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PSG9Q00887 426 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 DEFA6Q01524 100 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PAX8Q06710 450 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PDE6HQ13956 83 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PSG3Q16557 428 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 KLK9Q2XQG4 91 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 UNQ5815/PRO19632Q6UWF5 114 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 GOLT1AQ6ZVE7 132 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ATP5L2Q7Z4Y8 100 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRNTQ86SH4 94 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 EXOC3-AS1Q8N2X6 119 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 SIGLECL1Q8N7X8 197 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q8N9W7 124 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM75Q8N9X5 138 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR4B1Q8NGF8 309 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 DLX4Q92988 240 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF414Q96IQ9 312 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 NOL4LQ96MY1 436 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 VGLL1Q99990 258 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 SAMD10Q9BYL1 202 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 BPESC1Q9GZL8 116 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRO1933Q9H354 126 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 RPP21Q9H633 154 aaKnown RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q9HAA7 133 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 GNB4Q9HAV0 340 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 NAGKQ9UJ70 344 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 KLK9Q9UKQ9 250 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 PSG8Q9UQ74 426 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms