RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PPP1R1CQ8WVI7 109 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 MARVELD1Q9BSK0 173 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 SLC25A2Q9BXI2 301 aa13.19□□□□□ -0.3
CCDC78-204ENST00000439619 IFNA5P01569 189 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 NMBP08949 121 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 CSN1S1P47710 185 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
CCDC78-204ENST00000439619 ERCC8Q13216 396 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 FAM122CQ6P4D5 195 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 ATP5SQ99766 215 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 FUT9Q9Y231 359 aa13.18□□□□□ -0.3
CCDC78-204ENST00000439619 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 A0A1B0GVY2 172 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 OR7C2O60412 319 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 RNASE4P34096 147 aaKnown RBP13.17□□□□□ -0.3
CCDC78-204ENST00000439619 IFITM3Q01628 133 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 C9orf47Q6ZRZ4 202 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 AGPAT4-IT1Q9H0P7 198 aa13.17□□□□□ -0.3
CCDC78-204ENST00000439619 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 KLLNB2CW77 178 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 H0YIZ8 118 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 H2BFSP57053 126 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 EIF4E3Q8N5X7 224 aaKnown RBP13.16□□□□□ -0.3
CCDC78-204ENST00000439619 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 FAM167A-AS1Q96KT0 104 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
CCDC78-204ENST00000439619 HECTD4Q9Y4D8 3996 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 NBDYA0A0U1RRE5 68 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 H3BNG1 76 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 RGS13O14921 159 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 MPC2O95563 127 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 OR10J4P0C629 311 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 CRISP2P16562 243 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 TAS2R45P59539 299 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 DNAH6Q9C0G6 4158 aa13.15□□□□□ -0.3
CCDC78-204ENST00000439619 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-204ENST00000439619 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-204ENST00000439619 BTN1A1Q13410 526 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 KHDC3LQ587J8 217 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 LINC00588Q9Y4M8 146 aa13.14□□□□□ -0.31
CCDC78-204ENST00000439619 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 A0A0J9YY99 117 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 ZNF324O75467 553 aaPredicted RBP13.13□□□□□ -0.31
CCDC78-204ENST00000439619 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
CCDC78-204ENST00000439619 ZNF138P52744 262 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
CCDC78-204ENST00000439619 CD300CQ08708 224 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 Q6ZTI0 123 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 ZNF492Q9P255 531 aa13.13□□□□□ -0.31
CCDC78-204ENST00000439619 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
CCDC78-204ENST00000439619 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
CCDC78-204ENST00000439619 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
CCDC78-204ENST00000439619 IBA57Q5T440 356 aaKnown RBP13.12□□□□□ -0.31
CCDC78-204ENST00000439619 VGLL1Q99990 258 aa13.12□□□□□ -0.31
CCDC78-204ENST00000439619 TMPRSS5Q9H3S3 457 aa13.12□□□□□ -0.31
CCDC78-204ENST00000439619 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 HOXA5P20719 270 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 FAM74A1Q5RGS3 127 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 Q9H8V8 135 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 BATF3Q9NR55 127 aa13.11□□□□□ -0.31
CCDC78-204ENST00000439619 IGHV1OR15-1A0A075B7D0 117 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 TCL1AP56279 114 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 Q9H3A6 140 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 MBD2Q9UBB5 411 aa13.1□□□□□ -0.31
CCDC78-204ENST00000439619 A0A1W2PPV4 95 aa13.09□□□□□ -0.31
CCDC78-204ENST00000439619 ACOT6Q3I5F7 207 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-204ENST00000439619 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
CCDC78-204ENST00000439619 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
CCDC78-204ENST00000439619 SPINK4O60575 86 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 SLAQ13239 276 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 Q8TAT8 98 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 KLF12Q9Y4X4 402 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 LENEPQ9Y5L5 61 aa13.07□□□□□ -0.32
CCDC78-204ENST00000439619 ZNF266Q14584 549 aa13.06□□□□□ -0.32
CCDC78-204ENST00000439619 PQLC2Q6ZP29 291 aa13.06□□□□□ -0.32
CCDC78-204ENST00000439619 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
CCDC78-204ENST00000439619 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms