RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 C12orf54Q6X4T0 127 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 CACNA1AO00555 2505 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 NMUP48645 174 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 Q8N9W7 124 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 BSNQ9UPA5 3926 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
TTC3-209ENST00000438055 TRBV6-1A0A0K0K1D8 114 aa13.02□□□□□ -0.32
TTC3-209ENST00000438055 CCL25O15444 150 aa13.02□□□□□ -0.32
TTC3-209ENST00000438055 NPYP01303 97 aa13.02□□□□□ -0.32
TTC3-209ENST00000438055 SELENOKQ9Y6D0 94 aa13.02□□□□□ -0.32
TTC3-209ENST00000438055 ORAOV1Q8WV07 137 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 AP1S3Q96PC3 154 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 LINC01548A6NM66 108 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 PRSS1P07477 247 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 RPS20P60866 119 aaKnown RBP13.02□□□□□ -0.33
TTC3-209ENST00000438055 C21orf62-AS1Q17RA5 79 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 PRSS57Q6UWY2 283 aa13.02□□□□□ -0.33
TTC3-209ENST00000438055 A0A1W2PPR1 153 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
TTC3-209ENST00000438055 RNF151Q2KHN1 245 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 METTL26Q96S19 204 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 HIF1ANQ9NWT6 349 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 HBDP02042 147 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
TTC3-209ENST00000438055 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
TTC3-209ENST00000438055 LY6EQ16553 131 aa13□□□□□ -0.33
TTC3-209ENST00000438055 BRD3OSQ6XYD6 125 aa13□□□□□ -0.33
TTC3-209ENST00000438055 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
TTC3-209ENST00000438055 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 EEF1AKMT3Q96AZ1 226 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 SVEP1Q4LDE5 3571 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 FAM110DQ8TAY7 271 aaPredicted RBP12.99□□□□□ -0.33
TTC3-209ENST00000438055 MS4A6AQ9H2W1 248 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 IGHV2-70DA0A0C4DH43 119 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 BVES-AS1Q5T3Y7 98 aa12.99□□□□□ -0.33
TTC3-209ENST00000438055 UBE2E1P51965 193 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 C1orf122Q6ZSJ8 110 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 ACACBO00763 2458 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 GATA1P15976 413 aaPredicted RBP12.98□□□□□ -0.33
TTC3-209ENST00000438055 EFNA4P52798 201 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
TTC3-209ENST00000438055 ATP5G2Q06055 141 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 SIRPDQ9H106 197 aa12.98□□□□□ -0.33
TTC3-209ENST00000438055 LEPP41159 167 aa12.97□□□□□ -0.33
TTC3-209ENST00000438055 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
TTC3-209ENST00000438055 TM4SF20Q53R12 229 aa12.97□□□□□ -0.33
TTC3-209ENST00000438055 CBY1Q9Y3M2 126 aa12.97□□□□□ -0.33
TTC3-209ENST00000438055 NPFFO15130 113 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 IGHV3-11P01762 117 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 TRGV3P03979 118 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 Q8N6K4 173 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 ZNF48Q96MX3 618 aaPredicted RBP12.96□□□□□ -0.33
TTC3-209ENST00000438055 BUB3O43684 328 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 RAB9AP51151 201 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 ZNF493Q6ZR52 646 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 NAA38Q9BRA0 125 aaKnown RBP12.96□□□□□ -0.33
TTC3-209ENST00000438055 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
TTC3-209ENST00000438055 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.34
TTC3-209ENST00000438055 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.34
TTC3-209ENST00000438055 GAS8-AS1O95177 125 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
TTC3-209ENST00000438055 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
TTC3-209ENST00000438055 COX8AP10176 69 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 SLC50A1Q9BRV3 221 aa12.95□□□□□ -0.34
TTC3-209ENST00000438055 C7orf71A4D174 169 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 TRAV40A0A0B4J280 105 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
TTC3-209ENST00000438055 SPRY2O43597 315 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 DKK2Q9UBU2 259 aa12.94□□□□□ -0.34
TTC3-209ENST00000438055 HRNRQ86YZ3 2850 aaPredicted RBP12.93□□□□□ -0.34
TTC3-209ENST00000438055 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 EBI3Q14213 229 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 TMEM97Q5BJF2 176 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 CENPVL3A0A0U1RRI6 287 aa12.93□□□□□ -0.34
TTC3-209ENST00000438055 A0A096LNJ9 63 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 TRAV41A0A0B4J266 112 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 A1L4Q6 167 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 H3BVH4 76 aa12.92□□□□□ -0.34
TTC3-209ENST00000438055 OVOL3O00110 214 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms