RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 IGLC2P0DOY2 106 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 HIST1H1EP10412 219 aaKnown RBP5.4□□□□□ -1.54
VPS50-203ENST00000436177 IL7P13232 177 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 ARL16Q0P5N6 197 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 BAK1Q16611 211 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 Q9H3A6 140 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 TMPRSS5Q9H3S3 457 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 PRELID1Q9Y255 219 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 MRPS16Q9Y3D3 137 aaKnown RBP5.4□□□□□ -1.54
VPS50-203ENST00000436177 PRAC2D3DTV9 90 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 H3BQ15 152 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 RGS13O14921 159 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 ZNF253O75346 499 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 SLC25A5P05141 298 aaKnown RBP5.39□□□□□ -1.55
VPS50-203ENST00000436177 CT45A10P0DMU9 189 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 FGF7P21781 194 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 S100A11P31949 105 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 DAZ2Q13117 558 aaKnown RBP5.39□□□□□ -1.55
VPS50-203ENST00000436177 KIR3DS1Q14943 382 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 MIC13Q5XKP0 118 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 Q6ZTI0 123 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 TMEM37Q8WXS4 190 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 MRPL53Q96EL3 112 aaKnown RBP5.39□□□□□ -1.55
VPS50-203ENST00000436177 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 UPK3BQ9BT76 320 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 GPN1Q9HCN4 374 aaPredicted RBP5.39□□□□□ -1.55
VPS50-203ENST00000436177 KCNIP2Q9NS61 270 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 SLC39A9Q9NUM3 307 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 NUDT15Q9NV35 164 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 ZNF586Q9NXT0 402 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 WDR83OSQ9Y284 106 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 NACAE9PAV3 2078 aa5.39□□□□□ -1.55
VPS50-203ENST00000436177 TRBV19A0A075B6N1 114 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 TRAV6A0A075B6T7 132 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 TRAV5A0A0B4J249 113 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 LYRM1O43325 122 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 MPDU1O75352 247 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 GPX1P07203 203 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 BTF3P20290 206 aaKnown RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 RNASE4P34096 147 aaKnown RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 BTCP35070 178 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 RPL29P47914 159 aaKnown RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 SULT1A1P50225 295 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 PDE6HQ13956 83 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 MORN5Q5VZ52 161 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 EIF4E3Q8N5X7 224 aaKnown RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 LINC00612Q8N6U2 182 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 ZNF431Q8TF32 576 aaPredicted RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 BLNKQ8WV28 456 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 SAT2Q96F10 170 aaPredicted RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 C2orf50Q96LR7 162 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 LINC00477Q96M19 166 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 GSN-AS1Q9NRJ2 163 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 LYRM2Q9NU23 88 aaPredicted RBP5.38□□□□□ -1.55
VPS50-203ENST00000436177 ICOSQ9Y6W8 199 aa5.38□□□□□ -1.55
VPS50-203ENST00000436177 FAM24AA6NFZ4 105 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 M0R3E3 92 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 SIVA1O15304 175 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 TCRBP04435 133 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 ERVFC1-1P60608 527 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 ERCC8Q13216 396 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 ATP6V1FQ16864 119 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 ESRGQ1W209 222 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 PCNPQ8WW12 178 aaKnown RBP5.37□□□□□ -1.55
VPS50-203ENST00000436177 SEC22CQ9BRL7 303 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
VPS50-203ENST00000436177 SCRT2Q9NQ03 307 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 TMEM14CQ9P0S9 112 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
VPS50-203ENST00000436177 PKD1P98161 4303 aa5.37□□□□□ -1.55
VPS50-203ENST00000436177 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 IGKV2-40A0A087WW87 121 aaPredicted RBP5.36□□□□□ -1.55
VPS50-203ENST00000436177 NXPH4O95158 308 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 IGKV2D-40P01614 121 aaPredicted RBP5.36□□□□□ -1.55
VPS50-203ENST00000436177 IGHV3-53P01767 116 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 PYYP10082 97 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 CSN1S1P47710 185 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 TCL1AP56279 114 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 LINC00315P59091 139 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 ZNF415Q09FC8 603 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 SLAQ13239 276 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 BTN1A1Q13410 526 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 ICAM4Q14773 271 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 VWC2Q2TAL6 325 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 ANXA2RQ3ZCQ2 193 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 MZT2BQ6NZ67 158 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 FAM122CQ6P4D5 195 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 Q8N1X5 172 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 LINC00467Q9BRT7 94 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
VPS50-203ENST00000436177 IGHV1OR15-1A0A075B7D0 117 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 A0A096LPF7 62 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 TRGV4A0A0C4DH28 118 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 FAM240BA0A1B0GVZ2 78 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 IGSF23A1L1A6 192 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 KLLNB2CW77 178 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 OR7C2O60412 319 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms