RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 Q86TA4 180 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 IGHV2-5P01817 119 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 SAMD13Q5VXD3 122 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 ST20Q9HBF5 79 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 ACANP16112 2415 aa9.71□□□□□ -0.85
FCHSD1-201ENST00000435817 F2Z2F3 143 aa9.71□□□□□ -0.86
FCHSD1-201ENST00000435817 LBHQ53QV2 105 aaPredicted RBP9.71□□□□□ -0.86
FCHSD1-201ENST00000435817 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.86
FCHSD1-201ENST00000435817 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 YPEL3P61236 119 aaPredicted RBP9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 ATP5L2Q7Z4Y8 100 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 IFI27L1Q96BM0 104 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 C17orf77Q96MU5 243 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PPBPP02775 128 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 DEFB131AP59861 70 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV4-30-2A0A087WSY4 118 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PRR20EP86478 221 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PRR20CP86479 221 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PRR20DP86480 221 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PRR20BP86481 221 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 PRR20AP86496 221 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 C5orf30Q96GV9 206 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 LY96Q9Y6Y9 160 aa9.7□□□□□ -0.86
FCHSD1-201ENST00000435817 RPL35AP18077 110 aaKnown RBP9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 TNRC18O15417 2968 aaPredicted RBP9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 FAM223BA6NKX1 122 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 C1orf122Q6ZSJ8 110 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 FAM223AQ8IWN6 122 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 TMEM213A2RRL7 107 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 A6NJY4 79 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV3-53P01767 116 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 TMEM95Q3KNT9 176 aa9.69□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV4-39P01824 125 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 A0A087WWL8 130 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 FABP2P12104 132 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 HLA-DMBP28068 263 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 LOC400499M0QZD8 3231 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 J3QKU1 62 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV4-59P01825 116 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 GATA3P23771 443 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 ZNF491Q8N8L2 437 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 AKAP13Q12802 2813 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 PROP1O75360 226 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 BLCAPP62952 87 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 VCX2Q9H322 139 aa9.68□□□□□ -0.86
FCHSD1-201ENST00000435817 E7EUB6 86 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 APOMO95445 188 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 PDE6HQ13956 83 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 IGLV2-14P01704 120 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 WDFY3Q8IZQ1 3526 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 C3orf79P0CE67 100 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 ZNF876PQ49A33 203 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
FCHSD1-201ENST00000435817 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 CIDEAO60543 219 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 LINC00469Q8N7U9 141 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 LAMTOR2Q9Y2Q5 125 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 HOXB4P17483 251 aaPredicted RBP9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 RCHY1Q96PM5 261 aa9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
FCHSD1-201ENST00000435817 TRGV1A0A0A0MS02 117 aa9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 IFI27P40305 119 aaPredicted RBP9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 NDUFAF3Q9BU61 184 aa9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 CD300EQ496F6 205 aaPredicted RBP9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 XCL2Q9UBD3 114 aa9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 HOXA3O43365 443 aaPredicted RBP9.65□□□□□ -0.86
FCHSD1-201ENST00000435817 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.87
FCHSD1-201ENST00000435817 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
FCHSD1-201ENST00000435817 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
FCHSD1-201ENST00000435817 GUSBP1Q15486 140 aa9.64□□□□□ -0.87
FCHSD1-201ENST00000435817 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
FCHSD1-201ENST00000435817 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms