RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 GATD1Q8NB37 220 aa14.37□□□□□ -0.11
FAM3A-212ENST00000434658 URB1-AS1Q96HZ7 61 aa14.37□□□□□ -0.11
FAM3A-212ENST00000434658 MIEN1Q9BRT3 115 aa14.37□□□□□ -0.11
FAM3A-212ENST00000434658 PAM16Q9Y3D7 125 aa14.37□□□□□ -0.11
FAM3A-212ENST00000434658 TRAV40A0A0B4J280 105 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
FAM3A-212ENST00000434658 EREGO14944 169 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 ECSCRQ19T08 205 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 C15orf32Q32M92 178 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 Q6AWC8 147 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 COX8CQ7Z4L0 72 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 NDFIP1Q9BT67 221 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 A0A1B0GUT8 65 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 M0R2Z0 102 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 CT45A10P0DMU9 189 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 MRPL52Q86TS9 123 aaKnown RBP14.36□□□□□ -0.11
FAM3A-212ENST00000434658 ASCL2Q99929 193 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 NF1P21359 2839 aa14.36□□□□□ -0.11
FAM3A-212ENST00000434658 A0A1B0GW15 77 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 FAM181BA6NEQ2 426 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 IGHV4-38-2P0DP08 117 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 RHOGP84095 191 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 RIGQ13278 110 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 PRIMA1Q86XR5 153 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 C8orf49Q96NF6 230 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 SNHG12Q9BXW3 62 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 SMAD5-AS1Q9Y6J3 95 aa14.35□□□□□ -0.11
FAM3A-212ENST00000434658 CTRLP40313 264 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 SCGB2A2Q13296 93 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 CHCHD1Q96BP2 118 aaKnown RBP14.34□□□□□ -0.11
FAM3A-212ENST00000434658 M0R143 59 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 RAB4AP20338 218 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 GPR183P32249 361 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 PRR31Q5SQ13 230 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 C5orf56Q8N8D9 126 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 ZFAND3Q9H8U3 227 aa14.34□□□□□ -0.11
FAM3A-212ENST00000434658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.33□□□□□ -0.12
FAM3A-212ENST00000434658 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.12
FAM3A-212ENST00000434658 RAB9AP51151 201 aa14.33□□□□□ -0.12
FAM3A-212ENST00000434658 SAPCD1Q5SSQ6 148 aa14.33□□□□□ -0.12
FAM3A-212ENST00000434658 DMRTA1Q5VZB9 504 aa14.33□□□□□ -0.12
FAM3A-212ENST00000434658 BRD3OSQ6XYD6 125 aa14.33□□□□□ -0.12
FAM3A-212ENST00000434658 IGKV2-40A0A087WW87 121 aaPredicted RBP14.32□□□□□ -0.12
FAM3A-212ENST00000434658 A0A087X0K7 114 aa14.32□□□□□ -0.12
FAM3A-212ENST00000434658 IGHV1-69DA0A0B4J2H0 117 aa14.32□□□□□ -0.12
FAM3A-212ENST00000434658 IGKV2D-40P01614 121 aaPredicted RBP14.32□□□□□ -0.12
FAM3A-212ENST00000434658 IGHV1-69P01742 117 aa14.32□□□□□ -0.12
FAM3A-212ENST00000434658 PRB4P10163 310 aaPredicted RBP14.32□□□□□ -0.12
FAM3A-212ENST00000434658 EBLN2Q6P2I7 272 aa14.32□□□□□ -0.12
FAM3A-212ENST00000434658 ZNF705AQ6ZN79 300 aaPredicted RBP14.32□□□□□ -0.12
FAM3A-212ENST00000434658 CCDC140Q96MF4 163 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 CUBNO60494 3623 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 C2orf70A6NJV1 201 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 SH2D1AO60880 128 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 IGHG4P01861 327 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 CLEC3BP05452 202 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 BTF3P20290 206 aaKnown RBP14.31□□□□□ -0.12
FAM3A-212ENST00000434658 PMCHL1Q16048 86 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 SPATA45Q537H7 98 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 PRR25Q96S07 402 aa14.31□□□□□ -0.12
FAM3A-212ENST00000434658 LINC01548A6NM66 108 aa14.3□□□□□ -0.12
FAM3A-212ENST00000434658 G3V318 75 aa14.3□□□□□ -0.12
FAM3A-212ENST00000434658 RELQ04864 619 aaPredicted RBP14.3□□□□□ -0.12
FAM3A-212ENST00000434658 EEF1AKMT3Q96AZ1 226 aa14.3□□□□□ -0.12
FAM3A-212ENST00000434658 C2CD3Q4AC94 2353 aa14.3□□□□□ -0.12
FAM3A-212ENST00000434658 TMEM189A5PLL7 270 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 BUB3O43684 328 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 MOB4Q9Y3A3 225 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 TRBV7-1A0A0A6YYK4 115 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 IGHV1-24A0A0C4DH33 117 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 IGHV3-35A0A0C4DH35 117 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 M0QZ24 198 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 M0QZK8 103 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 LINC00614P0C842 121 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 ZNF493Q6ZR52 646 aa14.29□□□□□ -0.12
FAM3A-212ENST00000434658 IGHV3OR16-8A0A075B7F1 116 aa14.28□□□□□ -0.12
FAM3A-212ENST00000434658 CLPSL1A2RUU4 121 aa14.28□□□□□ -0.12
FAM3A-212ENST00000434658 CRIP2P52943 208 aaPredicted RBP14.28□□□□□ -0.12
FAM3A-212ENST00000434658 C19orf54Q5BKX5 351 aa14.28□□□□□ -0.12
FAM3A-212ENST00000434658 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
FAM3A-212ENST00000434658 C9orf139Q6ZV77 190 aa14.28□□□□□ -0.12
FAM3A-212ENST00000434658 MXRA5Q9NR99 2828 aa14.27□□□□□ -0.12
FAM3A-212ENST00000434658 NUTF2P61970 127 aaKnown RBP14.27□□□□□ -0.12
FAM3A-212ENST00000434658 LCN12Q6JVE5 192 aa14.27□□□□□ -0.12
FAM3A-212ENST00000434658 ZNF418Q8TF45 676 aaPredicted RBP14.27□□□□□ -0.12
FAM3A-212ENST00000434658 ATP6V0BQ99437 205 aa14.27□□□□□ -0.12
FAM3A-212ENST00000434658 VGLL1Q99990 258 aa14.27□□□□□ -0.12
FAM3A-212ENST00000434658 TCF21O43680 179 aa14.27□□□□□ -0.13
FAM3A-212ENST00000434658 HLA-DMBP28068 263 aa14.27□□□□□ -0.13
FAM3A-212ENST00000434658 RPS20P60866 119 aaKnown RBP14.27□□□□□ -0.13
FAM3A-212ENST00000434658 TMEM70Q9BUB7 260 aa14.27□□□□□ -0.13
FAM3A-212ENST00000434658 CLEC5AQ9NY25 188 aa14.27□□□□□ -0.13
FAM3A-212ENST00000434658 CRXO43186 299 aaPredicted RBP14.26□□□□□ -0.13
FAM3A-212ENST00000434658 OR5AL1P0C617 328 aa14.26□□□□□ -0.13
FAM3A-212ENST00000434658 BMI1P35226 326 aa14.26□□□□□ -0.13
FAM3A-212ENST00000434658 SSTP61278 116 aa14.26□□□□□ -0.13
FAM3A-212ENST00000434658 SRSF2Q01130 221 aaKnown RBP14.26□□□□□ -0.13
FAM3A-212ENST00000434658 IGFL4Q6B9Z1 124 aa14.26□□□□□ -0.13
FAM3A-212ENST00000434658 LYZL1Q6UWQ5 148 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms